SILENT_MODE BLOCK_FILE jp_eERkAqe.concise.blc MAX_NSEQ 833 MAX_INPUT_LEN 835 OUTPUT_FILE jp_eERkAqe.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 176 822 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 823 176 832 H SPACE SUB_CHARS 1 823 176 832 E SPACE SUB_CHARS 1 823 176 832 - SPACE STRAND 31 826 36 COLOUR_TEXT_REGION 31 826 36 826 51 STRAND 55 826 59 COLOUR_TEXT_REGION 55 826 59 826 51 STRAND 76 826 77 COLOUR_TEXT_REGION 76 826 77 826 51 STRAND 99 826 105 COLOUR_TEXT_REGION 99 826 105 826 51 STRAND 124 826 130 COLOUR_TEXT_REGION 124 826 130 826 51 STRAND 150 826 156 COLOUR_TEXT_REGION 150 826 156 826 51 HELIX 4 826 6 COLOUR_TEXT_REGION 4 826 6 826 50 HELIX 13 826 23 COLOUR_TEXT_REGION 13 826 23 826 50 HELIX 40 826 51 COLOUR_TEXT_REGION 40 826 51 826 50 HELIX 64 826 71 COLOUR_TEXT_REGION 64 826 71 826 50 HELIX 86 826 93 COLOUR_TEXT_REGION 86 826 93 826 50 HELIX 111 826 120 COLOUR_TEXT_REGION 111 826 120 826 50 HELIX 142 826 146 COLOUR_TEXT_REGION 142 826 146 826 50 HELIX 162 826 173 COLOUR_TEXT_REGION 162 826 173 826 50 STRAND 31 831 36 COLOUR_TEXT_REGION 31 831 36 831 51 STRAND 55 831 60 COLOUR_TEXT_REGION 55 831 60 831 51 STRAND 76 831 78 COLOUR_TEXT_REGION 76 831 78 831 51 STRAND 100 831 105 COLOUR_TEXT_REGION 100 831 105 831 51 STRAND 124 831 130 COLOUR_TEXT_REGION 124 831 130 831 51 STRAND 150 831 156 COLOUR_TEXT_REGION 150 831 156 831 51 HELIX 3 831 6 COLOUR_TEXT_REGION 3 831 6 831 50 HELIX 13 831 22 COLOUR_TEXT_REGION 13 831 22 831 50 HELIX 39 831 51 COLOUR_TEXT_REGION 39 831 51 831 50 HELIX 63 831 71 COLOUR_TEXT_REGION 63 831 71 831 50 HELIX 86 831 93 COLOUR_TEXT_REGION 86 831 93 831 50 HELIX 110 831 120 COLOUR_TEXT_REGION 110 831 120 831 50 HELIX 142 831 146 COLOUR_TEXT_REGION 142 831 146 831 50 HELIX 162 831 174 COLOUR_TEXT_REGION 162 831 174 831 50 STRAND 31 832 36 COLOUR_TEXT_REGION 31 832 36 832 51 STRAND 55 832 59 COLOUR_TEXT_REGION 55 832 59 832 51 STRAND 99 832 105 COLOUR_TEXT_REGION 99 832 105 832 51 STRAND 124 832 129 COLOUR_TEXT_REGION 124 832 129 832 51 STRAND 150 832 156 COLOUR_TEXT_REGION 150 832 156 832 51 HELIX 12 832 23 COLOUR_TEXT_REGION 12 832 23 832 50 HELIX 41 832 51 COLOUR_TEXT_REGION 41 832 51 832 50 HELIX 66 832 71 COLOUR_TEXT_REGION 66 832 71 832 50 HELIX 86 832 93 COLOUR_TEXT_REGION 86 832 93 832 50 HELIX 114 832 119 COLOUR_TEXT_REGION 114 832 119 832 50 HELIX 142 832 146 COLOUR_TEXT_REGION 142 832 146 832 50 HELIX 162 832 173 COLOUR_TEXT_REGION 162 832 173 832 50