SILENT_MODE BLOCK_FILE jp_E8HepCj.concise.blc MAX_NSEQ 742 MAX_INPUT_LEN 744 OUTPUT_FILE jp_E8HepCj.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 100 731 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 732 100 741 H SPACE SUB_CHARS 1 732 100 741 E SPACE SUB_CHARS 1 732 100 741 - SPACE STRAND 19 735 23 COLOUR_TEXT_REGION 19 735 23 735 51 STRAND 27 735 34 COLOUR_TEXT_REGION 27 735 34 735 51 STRAND 42 735 47 COLOUR_TEXT_REGION 42 735 47 735 51 STRAND 67 735 69 COLOUR_TEXT_REGION 67 735 69 735 51 HELIX 2 735 13 COLOUR_TEXT_REGION 2 735 13 735 50 HELIX 50 735 62 COLOUR_TEXT_REGION 50 735 62 735 50 HELIX 71 735 80 COLOUR_TEXT_REGION 71 735 80 735 50 HELIX 89 735 98 COLOUR_TEXT_REGION 89 735 98 735 50 STRAND 20 740 23 COLOUR_TEXT_REGION 20 740 23 740 51 STRAND 27 740 34 COLOUR_TEXT_REGION 27 740 34 740 51 STRAND 42 740 47 COLOUR_TEXT_REGION 42 740 47 740 51 STRAND 67 740 69 COLOUR_TEXT_REGION 67 740 69 740 51 HELIX 2 740 13 COLOUR_TEXT_REGION 2 740 13 740 50 HELIX 49 740 62 COLOUR_TEXT_REGION 49 740 62 740 50 HELIX 71 740 80 COLOUR_TEXT_REGION 71 740 80 740 50 HELIX 89 740 98 COLOUR_TEXT_REGION 89 740 98 740 50 STRAND 19 741 23 COLOUR_TEXT_REGION 19 741 23 741 51 STRAND 28 741 33 COLOUR_TEXT_REGION 28 741 33 741 51 STRAND 43 741 47 COLOUR_TEXT_REGION 43 741 47 741 51 STRAND 68 741 69 COLOUR_TEXT_REGION 68 741 69 741 51 HELIX 0 741 13 COLOUR_TEXT_REGION 0 741 13 741 50 HELIX 50 741 62 COLOUR_TEXT_REGION 50 741 62 741 50 HELIX 71 741 79 COLOUR_TEXT_REGION 71 741 79 741 50 HELIX 89 741 98 COLOUR_TEXT_REGION 89 741 98 741 50