SILENT_MODE BLOCK_FILE jp_bKUMeMT.concise.blc MAX_NSEQ 70 MAX_INPUT_LEN 72 OUTPUT_FILE jp_bKUMeMT.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 112 59 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 60 112 69 H SPACE SUB_CHARS 1 60 112 69 E SPACE SUB_CHARS 1 60 112 69 - SPACE STRAND 3 63 7 COLOUR_TEXT_REGION 3 63 7 63 51 STRAND 17 63 23 COLOUR_TEXT_REGION 17 63 23 63 51 STRAND 30 63 36 COLOUR_TEXT_REGION 30 63 36 63 51 STRAND 53 63 56 COLOUR_TEXT_REGION 53 63 56 63 51 STRAND 61 63 76 COLOUR_TEXT_REGION 61 63 76 63 51 STRAND 85 63 86 COLOUR_TEXT_REGION 85 63 86 63 51 STRAND 90 63 98 COLOUR_TEXT_REGION 90 63 98 63 51 STRAND 106 63 110 COLOUR_TEXT_REGION 106 63 110 63 51 STRAND 3 68 6 COLOUR_TEXT_REGION 3 68 6 68 51 STRAND 17 68 23 COLOUR_TEXT_REGION 17 68 23 68 51 STRAND 30 68 36 COLOUR_TEXT_REGION 30 68 36 68 51 STRAND 53 68 56 COLOUR_TEXT_REGION 53 68 56 68 51 STRAND 62 68 68 COLOUR_TEXT_REGION 62 68 68 68 51 STRAND 70 68 76 COLOUR_TEXT_REGION 70 68 76 68 51 STRAND 85 68 87 COLOUR_TEXT_REGION 85 68 87 68 51 STRAND 90 68 98 COLOUR_TEXT_REGION 90 68 98 68 51 STRAND 106 68 110 COLOUR_TEXT_REGION 106 68 110 68 51 STRAND 3 69 7 COLOUR_TEXT_REGION 3 69 7 69 51 STRAND 17 69 24 COLOUR_TEXT_REGION 17 69 24 69 51 STRAND 30 69 35 COLOUR_TEXT_REGION 30 69 35 69 51 STRAND 52 69 56 COLOUR_TEXT_REGION 52 69 56 69 51 STRAND 61 69 76 COLOUR_TEXT_REGION 61 69 76 69 51 STRAND 84 69 84 COLOUR_TEXT_REGION 84 69 84 69 51 STRAND 90 69 98 COLOUR_TEXT_REGION 90 69 98 69 51 STRAND 106 69 111 COLOUR_TEXT_REGION 106 69 111 69 51