QUERY                  : DHYNCVSSGGQCLYSACPIFTKIQGTCYRGEAKCCK : QUERY 
UniRef90_UPI0003C8E913 : DHYLCVKNEGICLYSSCPSYTKIEGTCYGGKAKCCK : UniRef90_UPI0003C8E913
UniRef90_UPI00042C5E65 : DHYICVKKGGTCNFSPCPLFNRIEGTCYSGKAKCC- : UniRef90_UPI00042C5E65
UniRef90_UPI0003333C90 : DHYKCIKNKGFCLYSNCPMYSKHEGTCYKGRANC-- : UniRef90_UPI0003333C90
UniRef90_UPI0003F062D3 : DQFVCADKGGTCNYSPCPSYSKMEGTCYNGKAKCC- : UniRef90_UPI0003F062D3
UniRef90_UPI0003318135 : DQYHCVKRGGTCNFSPCPLYTHHDGTCYSGKAKCC- : UniRef90_UPI0003318135
UniRef90_UPI00045D6FF8 : DHYKCATKGGTCNYSRCPRNNRLEGTCYGGKAKCC- : UniRef90_UPI00045D6FF8
UniRef90_UPI00034F32E0 : DHYQCVKNGGFCLYSACPVYSKIVGTCYSGKAKCC- : UniRef90_UPI00034F32E0
UniRef90_UPI00038EBB8A : DEVECSENGGHCNVYNCPNFSKYIGTCFNGKAKCCK : UniRef90_UPI00038EBB8A
UniRef90_G1Q7H5        : PEYTCAKQGGTCNFSPCPLYTQVKGYCYRGKAKCC- : UniRef90_G1Q7H5
UniRef90_G1TWT1        : DHYKCAKNGGTCHYSSCPLFSKIEGTCYGGRAKCC- : UniRef90_G1TWT1
UniRef90_UPI0003337523 : DHYRCVNNGGTCHYSLCPLFSEVKGTCYNGKAKCC- : UniRef90_UPI0003337523
UniRef90_G1M227        : DHYVCARRGGTCNFSPCPLFTRVDGTCYGGKAKCC- : UniRef90_G1M227
UniRef90_L8J5W3        : DSYICAGKGGTYNLSPCPLYNRIEGTCSRGKDKCC- : UniRef90_L8J5W3
UniRef90_K9IFT7        : PEYECVRKGGTCNFSPCPRFTRIDGACYQGRAKCC- : UniRef90_K9IFT7
UniRef90_UPI00038C4469 : DHYMCVRNGGFCLYSSCPVNTKITGTCYHGRAKCC- : UniRef90_UPI00038C4469

                       : 1---------11--------21--------31---- :
OrigSeq                : DHYNCVSSGGQCLYSACPIFTKIQGTCYRGEAKCCK : OrigSeq

Jnet                   : --EEEE----EEEEE------EEEEEE--------- : Jnet
jhmm                   : --EEEE----EEEEE------EEEEE---------- : jhmm
jpssm                  : --EEEE----EE---------EEEEEEE-------- : jpssm

Lupas 14               : ------------------------------------ : Lupas 14
Lupas 21               : ------------------------------------ : Lupas 21
Lupas 28               : ------------------------------------ : Lupas 28

Jnet_25                : --B-B----B-BBBB-BB-B--B-BBB------BB- : Jnet_25
Jnet_5                 : -----------B----B---------B------B-- : Jnet_5
Jnet_0                 : ------------------------------------ : Jnet_0
Jnet Rel               : 974772577344421577776168881357777889 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.