SILENT_MODE BLOCK_FILE jp_CenZ86q.concise.blc MAX_NSEQ 607 MAX_INPUT_LEN 609 OUTPUT_FILE jp_CenZ86q.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 332 596 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 597 332 606 H SPACE SUB_CHARS 1 597 332 606 E SPACE SUB_CHARS 1 597 332 606 - SPACE STRAND 33 600 36 COLOUR_TEXT_REGION 33 600 36 600 51 STRAND 98 600 110 COLOUR_TEXT_REGION 98 600 110 600 51 STRAND 115 600 120 COLOUR_TEXT_REGION 115 600 120 600 51 STRAND 130 600 135 COLOUR_TEXT_REGION 130 600 135 600 51 STRAND 166 600 172 COLOUR_TEXT_REGION 166 600 172 600 51 STRAND 269 600 272 COLOUR_TEXT_REGION 269 600 272 600 51 STRAND 288 600 290 COLOUR_TEXT_REGION 288 600 290 600 51 HELIX 7 600 12 COLOUR_TEXT_REGION 7 600 12 600 50 HELIX 41 600 48 COLOUR_TEXT_REGION 41 600 48 600 50 HELIX 52 600 58 COLOUR_TEXT_REGION 52 600 58 600 50 HELIX 76 600 94 COLOUR_TEXT_REGION 76 600 94 600 50 HELIX 176 600 185 COLOUR_TEXT_REGION 176 600 185 600 50 HELIX 189 600 217 COLOUR_TEXT_REGION 189 600 217 600 50 HELIX 229 600 235 COLOUR_TEXT_REGION 229 600 235 600 50 HELIX 254 600 261 COLOUR_TEXT_REGION 254 600 261 600 50 HELIX 280 600 287 COLOUR_TEXT_REGION 280 600 287 600 50 HELIX 304 600 313 COLOUR_TEXT_REGION 304 600 313 600 50 HELIX 318 600 325 COLOUR_TEXT_REGION 318 600 325 600 50 STRAND 33 605 37 COLOUR_TEXT_REGION 33 605 37 605 51 STRAND 58 605 58 COLOUR_TEXT_REGION 58 605 58 605 51 STRAND 98 605 111 COLOUR_TEXT_REGION 98 605 111 605 51 STRAND 115 605 120 COLOUR_TEXT_REGION 115 605 120 605 51 STRAND 130 605 135 COLOUR_TEXT_REGION 130 605 135 605 51 STRAND 149 605 149 COLOUR_TEXT_REGION 149 605 149 605 51 STRAND 165 605 172 COLOUR_TEXT_REGION 165 605 172 605 51 STRAND 271 605 272 COLOUR_TEXT_REGION 271 605 272 605 51 STRAND 286 605 290 COLOUR_TEXT_REGION 286 605 290 605 51 HELIX 7 605 12 COLOUR_TEXT_REGION 7 605 12 605 50 HELIX 41 605 48 COLOUR_TEXT_REGION 41 605 48 605 50 HELIX 52 605 57 COLOUR_TEXT_REGION 52 605 57 605 50 HELIX 76 605 94 COLOUR_TEXT_REGION 76 605 94 605 50 HELIX 176 605 185 COLOUR_TEXT_REGION 176 605 185 605 50 HELIX 189 605 217 COLOUR_TEXT_REGION 189 605 217 605 50 HELIX 229 605 235 COLOUR_TEXT_REGION 229 605 235 605 50 HELIX 254 605 260 COLOUR_TEXT_REGION 254 605 260 605 50 HELIX 280 605 284 COLOUR_TEXT_REGION 280 605 284 605 50 HELIX 304 605 313 COLOUR_TEXT_REGION 304 605 313 605 50 HELIX 318 605 325 COLOUR_TEXT_REGION 318 605 325 605 50 STRAND 34 606 36 COLOUR_TEXT_REGION 34 606 36 606 51 STRAND 98 606 107 COLOUR_TEXT_REGION 98 606 107 606 51 STRAND 116 606 120 COLOUR_TEXT_REGION 116 606 120 606 51 STRAND 130 606 136 COLOUR_TEXT_REGION 130 606 136 606 51 STRAND 169 606 173 COLOUR_TEXT_REGION 169 606 173 606 51 STRAND 268 606 272 COLOUR_TEXT_REGION 268 606 272 606 51 HELIX 7 606 12 COLOUR_TEXT_REGION 7 606 12 606 50 HELIX 41 606 48 COLOUR_TEXT_REGION 41 606 48 606 50 HELIX 50 606 58 COLOUR_TEXT_REGION 50 606 58 606 50 HELIX 69 606 73 COLOUR_TEXT_REGION 69 606 73 606 50 HELIX 76 606 94 COLOUR_TEXT_REGION 76 606 94 606 50 HELIX 176 606 185 COLOUR_TEXT_REGION 176 606 185 606 50 HELIX 189 606 217 COLOUR_TEXT_REGION 189 606 217 606 50 HELIX 229 606 235 COLOUR_TEXT_REGION 229 606 235 606 50 HELIX 252 606 261 COLOUR_TEXT_REGION 252 606 261 606 50 HELIX 280 606 290 COLOUR_TEXT_REGION 280 606 290 606 50 HELIX 304 606 313 COLOUR_TEXT_REGION 304 606 313 606 50 HELIX 318 606 325 COLOUR_TEXT_REGION 318 606 325 606 50