SILENT_MODE BLOCK_FILE jp_2wZ6M8D.concise.blc MAX_NSEQ 1057 MAX_INPUT_LEN 1059 OUTPUT_FILE jp_2wZ6M8D.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 165 1046 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1047 165 1056 H SPACE SUB_CHARS 1 1047 165 1056 E SPACE SUB_CHARS 1 1047 165 1056 - SPACE STRAND 117 1050 122 COLOUR_TEXT_REGION 117 1050 122 1050 51 HELIX 10 1050 18 COLOUR_TEXT_REGION 10 1050 18 1050 50 HELIX 25 1050 33 COLOUR_TEXT_REGION 25 1050 33 1050 50 HELIX 40 1050 52 COLOUR_TEXT_REGION 40 1050 52 1050 50 HELIX 56 1050 64 COLOUR_TEXT_REGION 56 1050 64 1050 50 HELIX 80 1050 88 COLOUR_TEXT_REGION 80 1050 88 1050 50 HELIX 97 1050 113 COLOUR_TEXT_REGION 97 1050 113 1050 50 HELIX 127 1050 138 COLOUR_TEXT_REGION 127 1050 138 1050 50 HELIX 142 1050 162 COLOUR_TEXT_REGION 142 1050 162 1050 50 STRAND 117 1055 122 COLOUR_TEXT_REGION 117 1055 122 1055 51 HELIX 10 1055 18 COLOUR_TEXT_REGION 10 1055 18 1055 50 HELIX 25 1055 33 COLOUR_TEXT_REGION 25 1055 33 1055 50 HELIX 40 1055 52 COLOUR_TEXT_REGION 40 1055 52 1055 50 HELIX 56 1055 64 COLOUR_TEXT_REGION 56 1055 64 1055 50 HELIX 80 1055 88 COLOUR_TEXT_REGION 80 1055 88 1055 50 HELIX 97 1055 113 COLOUR_TEXT_REGION 97 1055 113 1055 50 HELIX 127 1055 138 COLOUR_TEXT_REGION 127 1055 138 1055 50 HELIX 142 1055 163 COLOUR_TEXT_REGION 142 1055 163 1055 50 STRAND 117 1056 121 COLOUR_TEXT_REGION 117 1056 121 1056 51 HELIX 3 1056 4 COLOUR_TEXT_REGION 3 1056 4 1056 50 HELIX 10 1056 18 COLOUR_TEXT_REGION 10 1056 18 1056 50 HELIX 25 1056 33 COLOUR_TEXT_REGION 25 1056 33 1056 50 HELIX 40 1056 52 COLOUR_TEXT_REGION 40 1056 52 1056 50 HELIX 56 1056 64 COLOUR_TEXT_REGION 56 1056 64 1056 50 HELIX 81 1056 89 COLOUR_TEXT_REGION 81 1056 89 1056 50 HELIX 97 1056 113 COLOUR_TEXT_REGION 97 1056 113 1056 50 HELIX 127 1056 138 COLOUR_TEXT_REGION 127 1056 138 1056 50 HELIX 142 1056 162 COLOUR_TEXT_REGION 142 1056 162 1056 50