SILENT_MODE BLOCK_FILE jp_u6z6ijB.concise.blc MAX_NSEQ 880 MAX_INPUT_LEN 882 OUTPUT_FILE jp_u6z6ijB.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 103 869 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 870 103 879 H SPACE SUB_CHARS 1 870 103 879 E SPACE SUB_CHARS 1 870 103 879 - SPACE STRAND 18 873 20 COLOUR_TEXT_REGION 18 873 20 873 51 STRAND 26 873 30 COLOUR_TEXT_REGION 26 873 30 873 51 STRAND 34 873 39 COLOUR_TEXT_REGION 34 873 39 873 51 STRAND 43 873 47 COLOUR_TEXT_REGION 43 873 47 873 51 STRAND 64 873 65 COLOUR_TEXT_REGION 64 873 65 873 51 STRAND 77 873 79 COLOUR_TEXT_REGION 77 873 79 873 51 HELIX 2 873 11 COLOUR_TEXT_REGION 2 873 11 873 50 HELIX 52 873 57 COLOUR_TEXT_REGION 52 873 57 873 50 HELIX 81 873 84 COLOUR_TEXT_REGION 81 873 84 873 50 HELIX 87 873 101 COLOUR_TEXT_REGION 87 873 101 873 50 STRAND 18 878 20 COLOUR_TEXT_REGION 18 878 20 878 51 STRAND 26 878 30 COLOUR_TEXT_REGION 26 878 30 878 51 STRAND 34 878 39 COLOUR_TEXT_REGION 34 878 39 878 51 STRAND 42 878 47 COLOUR_TEXT_REGION 42 878 47 878 51 STRAND 64 878 65 COLOUR_TEXT_REGION 64 878 65 878 51 STRAND 77 878 79 COLOUR_TEXT_REGION 77 878 79 878 51 HELIX 2 878 11 COLOUR_TEXT_REGION 2 878 11 878 50 HELIX 52 878 57 COLOUR_TEXT_REGION 52 878 57 878 50 HELIX 81 878 84 COLOUR_TEXT_REGION 81 878 84 878 50 HELIX 87 878 101 COLOUR_TEXT_REGION 87 878 101 878 50 STRAND 18 879 21 COLOUR_TEXT_REGION 18 879 21 879 51 STRAND 26 879 30 COLOUR_TEXT_REGION 26 879 30 879 51 STRAND 34 879 39 COLOUR_TEXT_REGION 34 879 39 879 51 STRAND 43 879 47 COLOUR_TEXT_REGION 43 879 47 879 51 STRAND 64 879 65 COLOUR_TEXT_REGION 64 879 65 879 51 STRAND 71 879 73 COLOUR_TEXT_REGION 71 879 73 879 51 STRAND 77 879 78 COLOUR_TEXT_REGION 77 879 78 879 51 HELIX 3 879 12 COLOUR_TEXT_REGION 3 879 12 879 50 HELIX 52 879 58 COLOUR_TEXT_REGION 52 879 58 879 50 HELIX 81 879 84 COLOUR_TEXT_REGION 81 879 84 879 50 HELIX 87 879 101 COLOUR_TEXT_REGION 87 879 101 879 50