SILENT_MODE
BLOCK_FILE jp_oWkP0ih.concise.blc
MAX_NSEQ 266
MAX_INPUT_LEN 268
OUTPUT_FILE jp_oWkP0ih.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 128 255   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 256 128 265 H SPACE
SUB_CHARS 1 256 128 265 E SPACE
SUB_CHARS 1 256 128 265 - SPACE
STRAND 34 259 39
COLOUR_TEXT_REGION 34 259 39 259 51
STRAND 63 259 66
COLOUR_TEXT_REGION 63 259 66 259 51
STRAND 89 259 92
COLOUR_TEXT_REGION 89 259 92 259 51
STRAND 101 259 107
COLOUR_TEXT_REGION 101 259 107 259 51
HELIX 4 259 11
COLOUR_TEXT_REGION 4 259 11 259 50
HELIX 20 259 26
COLOUR_TEXT_REGION 20 259 26 259 50
HELIX 30 259 33
COLOUR_TEXT_REGION 30 259 33 259 50
HELIX 40 259 43
COLOUR_TEXT_REGION 40 259 43 259 50
HELIX 48 259 57
COLOUR_TEXT_REGION 48 259 57 259 50
HELIX 72 259 84
COLOUR_TEXT_REGION 72 259 84 259 50
STRAND 34 264 39
COLOUR_TEXT_REGION 34 264 39 264 51
STRAND 63 264 66
COLOUR_TEXT_REGION 63 264 66 264 51
STRAND 89 264 92
COLOUR_TEXT_REGION 89 264 92 264 51
STRAND 101 264 107
COLOUR_TEXT_REGION 101 264 107 264 51
HELIX 4 264 11
COLOUR_TEXT_REGION 4 264 11 264 50
HELIX 20 264 26
COLOUR_TEXT_REGION 20 264 26 264 50
HELIX 30 264 33
COLOUR_TEXT_REGION 30 264 33 264 50
HELIX 40 264 43
COLOUR_TEXT_REGION 40 264 43 264 50
HELIX 48 264 57
COLOUR_TEXT_REGION 48 264 57 264 50
HELIX 72 264 84
COLOUR_TEXT_REGION 72 264 84 264 50
STRAND 33 265 39
COLOUR_TEXT_REGION 33 265 39 265 51
STRAND 63 265 66
COLOUR_TEXT_REGION 63 265 66 265 51
STRAND 89 265 92
COLOUR_TEXT_REGION 89 265 92 265 51
STRAND 101 265 107
COLOUR_TEXT_REGION 101 265 107 265 51
HELIX 3 265 11
COLOUR_TEXT_REGION 3 265 11 265 50
HELIX 20 265 26
COLOUR_TEXT_REGION 20 265 26 265 50
HELIX 30 265 32
COLOUR_TEXT_REGION 30 265 32 265 50
HELIX 40 265 43
COLOUR_TEXT_REGION 40 265 43 265 50
HELIX 48 265 57
COLOUR_TEXT_REGION 48 265 57 265 50
HELIX 72 265 84
COLOUR_TEXT_REGION 72 265 84 265 50