QUERY : EVNSCDYWRHCAVDGFLCSCCGGTTTTCPPGSTPSPISWIGTCHNPHDGKDYLISYHDCCGKTACGRCQCNTQTRERPGYEFFLHNDVNWCMANENSTFHCTTSVLVGLA : QUERY
UniRef90_B8KXQ9 : DPQSCDYWRYCALGGSLCSCCGGSATTCPPGSEPSPISWIGTCHNPADGKDYLISYNDCCGKSYCERCVCHRTERDKPVYFPAKSNDILWCFGTESQAYHCTVSLVLGEA : UniRef90_B8KXQ9
UniRef90_W5IL64 : DPNSCDYWRYCSIDGFLCSCCGGSVSSCPPGTEVSQVAWVGTCHNPADGKNYIISYNDCCGKHSCNQCACTRNDSEEPAYRPFNNNDVNWCLAAKSHIYHCTVSVIRGVA : UniRef90_W5IL64
UniRef90_E3HHS0 : DDTACDYWRYCAVDGFLCSCCGGSMTSCPPGTSPSAVSWVGTCHNPLDGKDYLISYNDCCGKAACGKCMCASAERERPGYQMFLHNDVNWCMSNESSIFHCTTSVIVGLA : UniRef90_E3HHS0
UniRef90_UPI0003642204 : -ETDCDYWRYCGVDGFLCSCCGGSATSCPPGTTPSKVAWVGTCHNPADGKDYLISYNDCCGRGACGRCLCNTNIGERPGYRMGLHNDINWCMANDSSAFHCTTSIIVGVA : UniRef90_UPI0003642204
UniRef90_H5WRR9 : DPTKCEYWRYCAFDGYLCTCCGGSNTQCPPGTEASKVSWVGTCQNPADGRQYLVSYNDCCGKGACGECLCNNNERERPGYRLGVHNDINWCMANDNSMFHCTTSVIVGVA : UniRef90_H5WRR9
UniRef90_UPI0003B519E2 : DDTKCDYWRYCAIDGSLCSCCGGGMSSCPPGAEPSPVSWVGTCINPDDGKAYLIAYRDCCGKSACGQCGCDNTDRETQLYMPQLNNNVIWCFGTKSMEYHCSTAVLVGKA : UniRef90_UPI0003B519E2
UniRef90_A1K7R9 : -DEDCEYWRYCAQDGYLCNCCGGTASSCPPGTEASKVSWIGTCHNPEDGKDYLISYNDCCGKTACGRCFCNTNEREMPGYRMGLHNDINWCMANDSTMFHCTMATVVGLA : UniRef90_A1K7R9
UniRef90_UPI000349D5FB : -DANCDYWRYCALDGFLCSCCGGSVSACPPGAEPSKVTWVGTCHNPADGKDYLVSYNDCCGKTTCGRCLCNGNVGERPGYRMGIHNDINWCMANTPSMYHCTVSVLVGVA : UniRef90_UPI000349D5FB
UniRef90_F7VCB4 : DPTACNYWRYCAIDGFLCASCGGGVHSCPPGTSPSPTSWIGTCFNPGDGQSYLVAYRDCCGQDACSQPMCLGSEGDQPSYRPQANNDIIWCFGTGALIYNCSTSVIVGNA : UniRef90_F7VCB4
UniRef90_H1SHR4 : DETACDYWKYCAVDGFLCACCGGSSTTCPPGTEPSRVSWVGTCHNPSDGRHYMVSYNDCCGKTTCGRCECNTNERERPGYRLGVHNDVNWCMSNDSTMFHCTTSIILGV- : UniRef90_H1SHR4
UniRef90_A5VBD1 : DPQSCDYWRYCAIDGFLCSCCGGSTSSCPPGTEPSPITWVGTCRNPADGKDYVISYNDCCGKSGCGRCMCNRNEGDKPIHQPSGSNDINWCLGTQGMIYNCSTAVVLGAA : UniRef90_A5VBD1
UniRef90_K0C4Y8 : DPNECEYWRYCALDGNLCNDCGGSLTSCPPGSEASKVAWVGTCHNPNDGRDYLVSYNDCCGRAECNGTFCVTSERERPGYQMGVHNDINWCMANTSQGYHCTVAMLVGV- : UniRef90_K0C4Y8
UniRef90_D5W8B2 : DPYSCDYWRYCAIDGWLCSCCGGTSSSCPPGTTPSPITWIGTCRNPHDGTDYIVSYNDCCGKTSCGRCFCNRNEREKPLYKLSLNNDINWCMASGNANYHCSVSALLGVA : UniRef90_D5W8B2
UniRef90_U2FT32 : DPQSCDYWRYCSVDGFLCTCCGGTINACPPGTDVSEVTWVGTCHNPADGRDYVIAYNDCCGKQACGQCACNRNDSEQPLYRPFNNNDINWCLGAEHLTYNCTIATIRDVA : UniRef90_U2FT32
UniRef90_K6YKL0 : DEGSCDYWRYCAVDGFLCACCGGSTNSCPPGTEMSPITWIGTCTNPVDGRNYVISYNDCCGKTQCNSCLCQRDEGDRPLYRSDKSNDVNWCLGASSSVYHCSTAIVVGIA : UniRef90_K6YKL0
UniRef90_A4A7G4 : DNQSCDYWRYCAFSGQICSCCGGSMTQCPPGSETASVAWVGTCHNPLDGQDYLISYNDCCGKSACGRCGCHRSEGDRPVYFPSKSNSILWCFGSNSHAYHCTLARVVGKA : UniRef90_A4A7G4
UniRef90_F0LUF8 : DVNSCDYWRHCALDGNLCSSSGGSETTCPPGSEASKVAWVGTCLNPNDNKNYLVSYNDCCGKATVNSVACLNSERERPGYRMGLHNDINWCMANTNKGYHCTVAALVGLA : UniRef90_F0LUF8
UniRef90_M4SEZ3 : DDTECNYWRYCAIDGSLCTCCGGTTSMCPPGTQPSLTSWVGTCLNPDDKRLYLIAYRDCCGTSGCGRCRCDNTEEATPAYRPSGNNEIIWCFGTSSMAYHCSTAALVGVA : UniRef90_M4SEZ3
UniRef90_UPI0004794D0E : DPTACNYWRYCASDGYLCSCCGGSPSTCPPGTAPSPTSWVGSCINPDDGKTYLIAYQDCCGQDSCGRCACLGQEGDFPTYRPQVNNDIVWCFGASSMVYHCSSAILVGLA : UniRef90_UPI0004794D0E
UniRef90_I3UF22 : NSQACDYWRHCSIDGNICDCCGGSLTNCPPGSKLSPSSWVASCHNPGDGQSYLIAYRDCCGKQTCGRCNCVNTQGELPIYRPEFNNDVVWCFGAESMTYHCTISPIVGKA : UniRef90_I3UF22
UniRef90_UPI0003734FDA : -PTSCDYWRYCGVDGFLCACCGGSASTCPPGSEPSPITWVGTCRNPADGRSYIISYNDCCGQGSCNRCACTRNERETPTYDIRRDNDTNWCLAAKSMSYHCSTAVVVGLA : UniRef90_UPI0003734FDA
UniRef90_I0JZ86 : NESSCAYWRYCSIDGFLCSCCGGGVTACPPGTFPSPTHWVGSCRNPLDGKQYLISYRDCCGKGACGRCYCQTNETEMPVYQINRNNDTIWCFGAPNMMYHCTGASILGLA : UniRef90_I0JZ86
UniRef90_U7FZS3 : DENDCSYWKHCALDGNLCSTSGGSLTSCPPGTEASKVAWVGTCRNPADDKDYLVSYNDCCGRATVSSTFCFTSEGERPGYRMGLHNDINWCMANTNKGYHCTVSVVLGVA : UniRef90_U7FZS3
UniRef90_W5Y796 : DDMACDYWRYCAIDGYLCTSCGGGIHSCPPGTAPSPTSWIGSCFNPQDGRSYLIAYRDCCGQDACDEVNCLNTDGDQPSYRPMANNDIIWCFGTTSEMYNCSTAAIIG-- : UniRef90_W5Y796
UniRef90_B0T7F5 : DPTSCDYWRYCAIDGFLCSCCGGSVSTCPPGTEMSPITWIGTCTNPSDGRAYVISYNDCCGTSSCGQCSCHRSEGDRPQVRPQSNNDYNWCLGTESSIYHCSAAAIIGVA : UniRef90_B0T7F5
UniRef90_F4ANA5 : DPTTCEYWRYCGIDGFLCSCCGGSQSACPPGTEMSPITWIGTCLNPADNKHYIISYNDCCGKAACGRCFCNRNEDDTPMYRAFSNNDTNWCVGASSETYVCSTAVILGTS : UniRef90_F4ANA5
UniRef90_C6XQB1 : DDTSCDYWRYCALDGNLCTTMGGSTTSCPVGAEASEVSWVGTCHNPGDERDYLVSYYDCCGKTGYSEAFCLRSEGERPAYSMGLHNDINWCMANANKGYHCTVALIVGVA : UniRef90_C6XQB1
UniRef90_A4XFG9 : DPTSCDYWRYCAVDGFLCACCGGSASSCPPGTEPSPITWLGTCRNPADGRNYVISYNDCCGKAACGRCNCSRDEGATPVYQPTTANDLDWCLGTQAGAYHCSLSVVTGPA : UniRef90_A4XFG9
UniRef90_X5PYJ0 : DDKACEYWRYCALDGYLCTCCGGTVSSCPPGSEASVVTWVGTCQSAQDGKAYLISYNDCCGVTTCGRCPCNYNVGERPGYRMGVHNDINWCMANDRGIYHCTVAAVIGVS : UniRef90_X5PYJ0
UniRef90_Q1IAG2 : DPNSCEYWRHCAIDGFLCGCCGGTSSSCPPGTVRSDITWIGTCRNPTDGKDYVISYNDCCGKSNCGRCVCQRDQGDTPLYRPQSSNDLNWCSGSQDMPYHCSLSVVIGV- : UniRef90_Q1IAG2
UniRef90_UPI0004795654 : EVVDCNYWRLCAMDGALCSDSGGSMTSCPPGSDASKVSWVGTCHNPEDGKDYLISYNDCCGKAKVSATQCLNSKGERPGYRMGLHNDVNWCMANEQKGYHCTVALVVGVA : UniRef90_UPI0004795654
UniRef90_UPI00036573BE : ----CNYWRYCAIDGYVCSCCGGTPSSCPPGTSPAPTSWVGTCLNPVDGKHYLISYRDCCGKGSCGRCACLGLEGELPAYRAQKNNDIIWCYGAPDMMYHCSSAVVIGEA : UniRef90_UPI00036573BE
UniRef90_W5Y880 : DPTKCDYWRHCAIDGVLCGCCGGGVHTCPPGTQPSPVSWIGTCRNPVDNRSYVIAYRDCCGRTLCNSCHCNTEDRELPVYRPQANNDIIWCFGGSSAVYHCSTAALVGQA : UniRef90_W5Y880
UniRef90_K2JVR4 : -PEDCEYWRYCSLHGGLCSHCGGTVTQCPPGSTPSKVAWVGTCRNPNDNKDYLVSYNDCCGTGGCETDGCSRQEGDMPGYRMGLASESSWCLANTDNSIHCTLAIVVGLA : UniRef90_K2JVR4
UniRef90_V9XJQ1 : DPAECEYWRWCNMDGTSCAACGGGVTTCAPGSRPGAEFWVGCCTHPDTGKTYLIAYYDCCGAPSCSNAFCGEPDMQAIMYNPSFDQEIIWCVSDESQSYTCTMAPIIG-- : UniRef90_V9XJQ1
UniRef90_A7LBX2 : ---------HCSIDGNICDCCGGSLTNCPPGTRLSPSSWVASCYNPGDKQSYLIAYRDCCGKNVCGRCGCLNTEGELPVYRPEFANDIIWCFGAEDDA------------ : UniRef90_A7LBX2
UniRef90_A7LBX6 : ---------YCALGGMLCSCCGGSMTSCPPGAEPSPITWVGTCRNPVDDLDYLISYNDCCGKPVCDRCFCHRTERDKPVYFPSKANDILWCFGTES-------------- : UniRef90_A7LBX6
UniRef90_H9D2Z0 : ----------------ICDCSGGSLTNCPPGTKLASSSWVASCYNPTDKQTYLISYRDCCGQNVSGRCACLNTEGELPVYRPEFGNDIIWCFGAEDMTYHCTIS------ : UniRef90_H9D2Z0
UniRef90_A7LBX5 : ---------YCAMSGTLCTCCGGSYTSCPPGSEASPITWVGTCTNPVDGRDYLMSYNDCCGKAVCARCSCHNTEGDKPVYFNSNSSTVLWCFGTEN-------------- : UniRef90_A7LBX5
UniRef90_V9RU20 : ----------------------------------------GSCAGLKDGKDYLISYNDCCGKTACGKCMCASAERERPGYQMFLHNDVNWCMSNESSIFHCTTSVIVGLA : UniRef90_V9RU20
UniRef90_F8UU03 : ------------------------------GTSLSPSSWVASCYNPGDDQTYLIAYRDCCGKQTCGRCSCLNTEGELPVYRPEFSNDIVWCFGNDDMTXHC--------- : UniRef90_F8UU03
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101------- :
OrigSeq : EVNSCDYWRHCAVDGFLCSCCGGTTTTCPPGSTPSPISWIGTCHNPHDGKDYLISYHDCCGKTACGRCQCNTQTRERPGYEFFLHNDVNWCMANENSTFHCTTSVLVGLA : OrigSeq
Jnet : -------EEEE-----E-------------------EEEEEEE-------EEEEEE-------------------------------EEEEE------EEEEEEEEE--- : Jnet
jhmm : -------EEEE-----EE-----------------EEEEEEEE-------EEEEEE----------------------EE-------EEEEE------EEEEEHHH---- : jhmm
jpssm : -------EEEE---------------------------EEEEE-------EEEEEE-------------------------------EEEEEE-----EEEEEEEEE--- : jpssm
Lupas 14 : -------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : -------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : -------------------------------------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : ----B-BBBBBBB-B-BB-BBBBBBB-BBBB---B--BBBBBB-B------BBBBBBBBBB---B--B-B------BBBB-B-----BBBBBB-----BBBBBBBBBB-- : Jnet_25
Jnet_5 : -------B-BB-B---BB--B------B----------BBB-B--------BBBBB--BB----B----B-----------------B-BBB--------BBBB-B---- : Jnet_5
Jnet_0 : -----------------B--------------------B-B-------------B----------------------------------------------B-B------ : Jnet_0
Jnet Rel : 99888733453367640146677777777777776214467752778873588874367777666666777776421211677775043676158884688883221699 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.