SILENT_MODE BLOCK_FILE jp_lM_v7RQ.concise.blc MAX_NSEQ 571 MAX_INPUT_LEN 573 OUTPUT_FILE jp_lM_v7RQ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 253 560 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 561 253 570 H SPACE SUB_CHARS 1 561 253 570 E SPACE SUB_CHARS 1 561 253 570 - SPACE HELIX 2 564 10 COLOUR_TEXT_REGION 2 564 10 564 50 HELIX 15 564 31 COLOUR_TEXT_REGION 15 564 31 564 50 HELIX 37 564 57 COLOUR_TEXT_REGION 37 564 57 564 50 HELIX 63 564 79 COLOUR_TEXT_REGION 63 564 79 564 50 HELIX 81 564 86 COLOUR_TEXT_REGION 81 564 86 564 50 HELIX 92 564 108 COLOUR_TEXT_REGION 92 564 108 564 50 HELIX 127 564 139 COLOUR_TEXT_REGION 127 564 139 564 50 HELIX 144 564 166 COLOUR_TEXT_REGION 144 564 166 564 50 HELIX 175 564 186 COLOUR_TEXT_REGION 175 564 186 564 50 HELIX 193 564 203 COLOUR_TEXT_REGION 193 564 203 564 50 HELIX 214 564 230 COLOUR_TEXT_REGION 214 564 230 564 50 HELIX 240 564 248 COLOUR_TEXT_REGION 240 564 248 564 50 STRAND 186 569 187 COLOUR_TEXT_REGION 186 569 187 569 51 HELIX 2 569 10 COLOUR_TEXT_REGION 2 569 10 569 50 HELIX 15 569 30 COLOUR_TEXT_REGION 15 569 30 569 50 HELIX 37 569 56 COLOUR_TEXT_REGION 37 569 56 569 50 HELIX 63 569 78 COLOUR_TEXT_REGION 63 569 78 569 50 HELIX 82 569 86 COLOUR_TEXT_REGION 82 569 86 569 50 HELIX 92 569 108 COLOUR_TEXT_REGION 92 569 108 569 50 HELIX 129 569 140 COLOUR_TEXT_REGION 129 569 140 569 50 HELIX 146 569 165 COLOUR_TEXT_REGION 146 569 165 569 50 HELIX 175 569 185 COLOUR_TEXT_REGION 175 569 185 569 50 HELIX 193 569 203 COLOUR_TEXT_REGION 193 569 203 569 50 HELIX 215 569 230 COLOUR_TEXT_REGION 215 569 230 569 50 HELIX 240 569 247 COLOUR_TEXT_REGION 240 569 247 569 50 STRAND 116 570 117 COLOUR_TEXT_REGION 116 570 117 570 51 HELIX 2 570 10 COLOUR_TEXT_REGION 2 570 10 570 50 HELIX 15 570 32 COLOUR_TEXT_REGION 15 570 32 570 50 HELIX 37 570 58 COLOUR_TEXT_REGION 37 570 58 570 50 HELIX 63 570 86 COLOUR_TEXT_REGION 63 570 86 570 50 HELIX 92 570 108 COLOUR_TEXT_REGION 92 570 108 570 50 HELIX 127 570 139 COLOUR_TEXT_REGION 127 570 139 570 50 HELIX 143 570 167 COLOUR_TEXT_REGION 143 570 167 570 50 HELIX 176 570 187 COLOUR_TEXT_REGION 176 570 187 570 50 HELIX 193 570 203 COLOUR_TEXT_REGION 193 570 203 570 50 HELIX 214 570 230 COLOUR_TEXT_REGION 214 570 230 570 50 HELIX 240 570 249 COLOUR_TEXT_REGION 240 570 249 570 50