QUERY : YSNERVEKIIQDLLDVLVKEEVTPDLALMCLGNAVTNIIAQVPESKRVAVVDNFTKALKQSV : QUERY
UniRef90_L0M0M1 : YSDEHVERLLSELVNVLEQHKTPTDLSLMVLGNMVTNLINSVAPAQRQAIARSFAQALQSSI : UniRef90_L0M0M1
UniRef90_A4SP90 : YTNQQFDDLMNDLITVLEKHKAPVDLSLMVLGNVTTNIINGMAPAQRQAITEKYVQALTSSV : UniRef90_A4SP90
UniRef90_H5UXI9 : YSDERVEALLTEMVNVLEKHKAPTDLSLMVLGNMVTNLINSISPAQRQALAHSFAEALKSSI : UniRef90_H5UXI9
UniRef90_UPI00037769B8 : YSDEHVEQLLAELVQVLEKHKTPTDLSLMLLGNMVTNLINSIAPAQRHAMARSFADALQASV : UniRef90_UPI00037769B8
UniRef90_UPI00035CFCBE : YSDERVEALLTELVEVLEKHKAPTDLSLMVLGNMVTHLLNNVSAPQRQLLARSFADALLASV : UniRef90_UPI00035CFCBE
UniRef90_R8AV61 : YSDEKVEQILNEMIETLERHQVPVDLSLMVLGNMVTNVINSIAPAQRKVIARSFADALLSSV : UniRef90_R8AV61
UniRef90_E8XSQ8 : YSDEHVEQLLSELATVLEKHRAPTDLALMVLGNMVTNLINSVAPAQRKALSQSFAKALQASI : UniRef90_E8XSQ8
UniRef90_B4ET91 : YSDEQVEQLLAELVSVLEKHHTPTDLSLMVLGNMVTNLINSIAPAQRMLIADSFVHALRASI : UniRef90_B4ET91
UniRef90_K8W284 : YSDEKVEGLLSDLVSVLEKNHTPVDLSLMVLGNMVTNLLNSVAPAQRKMIAESFANALLSSV : UniRef90_K8W284
UniRef90_F9S1N4 : YSDEKFENILTEVAAVLAKHGAGPDLSLMIAGNIATNVINEVGQGQRKAIAEKFAQALLSSI : UniRef90_F9S1N4
UniRef90_N9TZF9 : YKNEQFDALMNELIAVLEQSKAPVDLSLMVLGNLATNIINELPQAQRQAIAEKFVQALTASV : UniRef90_N9TZF9
UniRef90_Q1ZRY4 : YSNKQVEQIIDDMFDVLEKHKTSPELALMVVGDIATNIINNVPAAQRAVIAEKFAKALQTSI : UniRef90_Q1ZRY4
UniRef90_UPI000374C900 : YSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNLINSIAPAQRHQIANSFARALQSSI : UniRef90_UPI000374C900
UniRef90_B6EIU9 : YSNKQIEQMLTEMVDVLDKHRAPADLSLMLVGNIATNVLNQVPAEQRKIIAEKFAQALLSSL : UniRef90_B6EIU9
UniRef90_C6CL38 : YSDEQIEQLLTDLVNVLEKHHTPTDLALMVLGNMVTNLLNTANPKQRAALAGSFADALQASI : UniRef90_C6CL38
UniRef90_C6C8H7 : YSDELIEQLLLDLVGVLETHRAPTDLALMVLGNMVTNLINSVAPEQRAALARTFASALQASV : UniRef90_C6C8H7
UniRef90_L8J491 : YPNKKVEQIIEDVFDVLEKHDASAELALMIMGNIATNIINDVPASQRKAIAEKFAQALQTSI : UniRef90_L8J491
UniRef90_UPI000395C793 : YDDKQVERIISDVVNVLEQHDASTDLSLMVIGNVATNILNHIPAAQRQAFAEKFAQALMASI : UniRef90_UPI000395C793
UniRef90_H2FZ93 : --DKQFDQLLSELEAVMDKHQAPADLRLMVLGNLATHIINQVAPGQRKAIADKFASVLTSSV : UniRef90_H2FZ93
UniRef90_W0HKM8 : YSDEQVEVLLAELAAVLEKHRTPTDLALMVLGNMVTHVITRVAPEMRGTLVKSFTDTLHASV : UniRef90_W0HKM8
UniRef90_U3TTJ0 : YSDARVEQLLAQLAQVLEKDKAPTDLSLMVLGNMVTNLINDIAPAQRRSLARSFAEAMQSSV : UniRef90_U3TTJ0
UniRef90_UPI0003944346 : YSDQQIETILTEIAAVFDKHDASPDLVLMIAGNIATNVLNQVAESQRKAIAEKFAQALISSI : UniRef90_UPI0003944346
UniRef90_Q7MMA6 : YTDEQVESILTEIGAVLDKHGATPELSLMIAGNIATNVLNQVAASQRKLIAEKFAQALISSL : UniRef90_Q7MMA6
UniRef90_UPI0002E3DDAB : YSDEKIEKILAEIAAVLKKHEANADLSLMIAGNIVTNILNSVPKSQRKLIADKFSQALLSSI : UniRef90_UPI0002E3DDAB
UniRef90_A3QCZ0 : YSNAQVEAVIAEILAVLDKHQAPTDLSLMVLGNCVTDLLRKVPEEARAQVAEQFAKALTQSV : UniRef90_A3QCZ0
UniRef90_A6CXJ9 : YTDQQVEDILSEVAAVLDKHGASAELSLMIAGNIATNVLNQVAPSQRQAIAEKFSKALISSL : UniRef90_A6CXJ9
UniRef90_K7AD66 : YSDSQFEAIMHDIIIALEKNQANRDLSLMVLGNVVTNIFHQVPENQRQQMAEQFTQVLLKSI : UniRef90_K7AD66
UniRef90_A1S5V7 : YTNTQVETLIAEVLAVLEKHQAPTDLGLMVLGNCVSHLLTKVPVASRAAVAEQFAKALNQSV : UniRef90_A1S5V7
UniRef90_A6FJN2 : YQSDKVEKVIDEVIDVLEKHDAPLDLGLMVLGNAAANIINSLSPKQRQAVAEKFAKALVASV : UniRef90_A6FJN2
UniRef90_D0YVM7 : YSTKQVEKIIDEVFDVLEKNQVSPELALMIVGDVATNVINSVPAGQRQAIAEKFALALQSTI : UniRef90_D0YVM7
UniRef90_F9Q890 : YSDAQVNAIAGEMIGILENHKAPADLALIVLGNLASNILTNVPVAQREAVAQAFANSLINAI : UniRef90_F9Q890
UniRef90_UPI0003B578A4 : YSNEKIEKILDEVMEVLHKNDVSVDLSLMVLGNSLTHIINQVPLHQREKITEKFVKAFTASI : UniRef90_UPI0003B578A4
UniRef90_W0QU32 : YQDVQLDALVNDLIIALEKHKAPADLSLMALGNLVTNILNFQTEAQRHVVADSFASALKNSL : UniRef90_W0QU32
UniRef90_B8CNP8 : YSNTQVESLITELLAVLEKHQSPTDLSLMALGNCVTHLLNKVPAEAREVVTEQFAKALSQSV : UniRef90_B8CNP8
UniRef90_I3D6A7 : YQDKQVDAILNDMIQVLEKHKAPVDLSLIVLGHMVTNLLTSVGTNQRTALAQAFSDALLNSV : UniRef90_I3D6A7
UniRef90_U1LQL3 : YSNEQVEQIVDQLLNVLTENQATVDLSLMCLGNSITHIIEHVPEQKRQAVAENFAKALTQSV : UniRef90_U1LQL3
UniRef90_UPI0003F83069 : YSTQQIENILNELLEVLNKHDASTELGLMVLGNAATHIINSVAPEQREHIAQQFGKVLVSSM : UniRef90_UPI0003F83069
UniRef90_C3LNZ1 : YSDEHVESILTEIAAVLNKHNASPELTLMVVGNIATNVINQVAAAQRKVIAEKFAQALVSSL : UniRef90_C3LNZ1
UniRef90_B8F3K1 : YQDKQIEALLNDLIVTLEKHKAPVDLSLMALGNMITNILNVQSPQQREVLAEAFSSALKNSL : UniRef90_B8F3K1
UniRef90_A4CAM8 : YSNEQVEKIVDEVITLLQSHKAPVDLSLMCLGNAITHIISHVPAKKQAEVASNFAQALKQSV : UniRef90_A4CAM8
UniRef90_UPI00047AB697 : YHTKQFDNLLADLIITVEKHKAPVDLVLMALGNMVTNILNIQSPPQREALADAFSNALKQSL : UniRef90_UPI00047AB697
UniRef90_E3BI41 : YSDTEVEKILAEVAAVLEKHAVGPELALMIAGNIATNVLNQVAASQRAVIAEKFTQALISSI : UniRef90_E3BI41
UniRef90_X2JNC7 : YQDKQIDEILNDMIAVLEKHQAPLDLSLIVLGNMTTNLLGSVGKQQRQVLAKAFSDALLNSL : UniRef90_X2JNC7
UniRef90_F2GC57 : YSNDQFETLMNNVILTLEEGGANRDLSLMVLGNVITHILNQVAPEDREAMATQFADVLKKSV : UniRef90_F2GC57
UniRef90_UPI0004719E64 : YSNAQVEAIINDVLAVLSKHQAPTDLSLMVLGDCISNLLNKVPEQSRALVAEQFAKALTQSI : UniRef90_UPI0004719E64
UniRef90_V5HG18 : YSDEKVETMLAEIATVLERHESTPELSLMLVGNIATNVLNQVAKGQRKVIAKTFADALIASV : UniRef90_V5HG18
UniRef90_L8DDE6 : YSNERVEKNTDRLLKVLSDDKATVDLSLMCLGNSITHILNHVPADKRQAVAENFAKALVQSL : UniRef90_L8DDE6
UniRef90_U1M7U5 : YSDQQVENLVDDLLKTLVAHKAPLDLSLMSLGNTLSHIINEVPAAQRQALIDNFTQALKDSV : UniRef90_U1M7U5
UniRef90_UPI0000E0FA01 : YNDAQFEVILNDVLACLEKHQATRDLSLMVLGNAVTHIFHQVDERIRTQMVEQFCSVLTRSV : UniRef90_UPI0000E0FA01
UniRef90_Q15QF3 : YSDTQFENVMHDIIIALEKHQASRDLSLMALGNVITNIFQQVNESQRSEMADKFTQVLLKSI : UniRef90_Q15QF3
UniRef90_E1W457 : YSDGQVNAIINDMISVLETHKAPVDLSLIALGNMASNLLTSVPAAQREALAQAFANSLMNSV : UniRef90_E1W457
UniRef90_UPI00034522FF : YTNEEVEQLVDQLVAVLAEKKAPVDLSLMCLGNTITHIIEHVPEAKRASVAQNFANALADSV : UniRef90_UPI00034522FF
UniRef90_A6VMF1 : YSDKQVDAVLHDMIAVLEKHQAPVELSLIVLGNMVTNLLSSVGTHQQAALAQAFSDALMNSV : UniRef90_A6VMF1
UniRef90_I2NJ90 : YQNNQFDTLLQDLFIVLEQHKAPADLSLMVLGNMVTNIIQNQDEQQRERLAEAFANSLKHSL : UniRef90_I2NJ90
UniRef90_K6YC50 : YSDAQFEALMNDIVFALEKNEANRDLSLMALGNVITNILHQVNESQREKMAAQFTQILMKSI : UniRef90_K6YC50
UniRef90_A1SWZ4 : YSNKKIETILDEVMEVLHQNDVSVDLSLMVLGNAITHVINQVPVDKRAQISEKFVKALSVSI : UniRef90_A1SWZ4
UniRef90_G4QLJ3 : YSNKEFEAAMQDVFDALEKNNANRDLSLMVLGNVLSNIFTQVALEKREAMVEQFCNVLKRAV : UniRef90_G4QLJ3
UniRef90_J1PYQ3 : YSSSQIEKLVNQLLDTLHQQHATTELSLMCLGNAVSHIINSVPAAQRAAVASSFSQALTDAI : UniRef90_J1PYQ3
UniRef90_W1FIS9 : --------------------KTPTDLSLMVLGNMVTNLINSVAPAQRQAIAKSFAQALQSSV : UniRef90_W1FIS9
UniRef90_C8KX25 : YKSEQLDELLKDLFIVLEKHKAPADLSLMALGNMVTNILHHSAQAQRERLAEAFAATLKNAL : UniRef90_C8KX25
UniRef90_UPI00036D46FE : YQDTEFEALMNQVIETLEENQADRDLSLMVLGNVITHILTQVKQQDRSAMAEKFADVLVKSV : UniRef90_UPI00036D46FE
UniRef90_I1E1L1 : YSTAQIEKLVNQLLDVLHSEKATTELSLMCLGNAISHVVNSVPPAQRQAVVSHFNQALVDAV : UniRef90_I1E1L1
UniRef90_UPI0003FD668A : YSDQQFDALMHDIIVAIEKNNADRDLSLMVLGNVISSIFEQVAPAHRAQMAEQFTQVLLKSI : UniRef90_UPI0003FD668A
UniRef90_Q7VLE3 : YQSKQFEQLSYDLITILEKHKAPVDLSIMALGNLVSNILNIQTETQRMVLADTFSTALKNSL : UniRef90_Q7VLE3
UniRef90_UPI0003670785 : YSNEEIETVINELLAVVAKNNLNTDAALMCLGNAASHIINHFDDKQKTIIAEKFAEALVAS- : UniRef90_UPI0003670785
UniRef90_R9PN92 : -----MEQLLNDVLKVVDNHNVTTDLALMVLGNAATCMINQVAPEQRKKLTEGFAKALKNSI : UniRef90_R9PN92
UniRef90_F7RWR7 : YDQERQDQLIDSILDILAKDKAPNDLALMTLGNVVTHILEHVPAQKRQAIAKQFGQILLQSV : UniRef90_F7RWR7
UniRef90_H5TA54 : YSNKEFDALTEAVFLALEKHKAKGDLSIMVLGNVLANIFHQVNDELRPLMINQFCDALKKS- : UniRef90_H5TA54
UniRef90_F7NU70 : YSTDQIEKIVNTLLEQLRAEDATTELSLMCLGNTISHIINSVPAAQRMDVVTHFGQALKDAV : UniRef90_F7NU70
UniRef90_R1GP73 : YQDKNVEQILNDVVNVLEKHKVSTDLSLMVVGIATNIINNNLPAAQRQLIAEKFAQALLSSI : UniRef90_R1GP73
UniRef90_D2TYN6 : YSDEQIEHLLLELVKVLEKHKAPTNLSLIVLGNMVTNLINTVTLTQRKTIAESFAQALLSSV : UniRef90_D2TYN6
UniRef90_J5HK87 : YKSEQLDNLIQDLFIVLEQHKAPNDLALMALGNLVTNIIRNNAEVQRERLAQAFGNTLQNAL : UniRef90_J5HK87
UniRef90_K2JWE9 : YNQQQLDHLLDDILTVFESQQIPAELALMALGNAVSNVVEQYPEEKRAAVAKQFSNILLQSL : UniRef90_K2JWE9
UniRef90_K5V7Q1 : ------------MGAVLEKHAASPELTLMIAGNIATNVLNQVAASQRKVIAEKFAQALMSSL : UniRef90_K5V7Q1
UniRef90_F4HDZ1 : ---------MNEMIGTLEKHQAPVDLSLIVLGDMVSNLLSSVQENKRIELAEAFSQALLNSL : UniRef90_F4HDZ1
UniRef90_UPI000404D74A : YDAARQEQLLNDVLDTLITAEVPVDLALMTLGNAVTHILSHYSPAQAQQVAEQFGKVLLQSM : UniRef90_UPI000404D74A
UniRef90_K2JP72 : YDPERITNLSSDLLGLLSKEKVPVDLALMVLGNVLSNVVNNVPAGQRAALVKQFAKTLEQSV : UniRef90_K2JP72
UniRef90_E1SQL8 : ------------------KRKTPTDLALMALGNAATVLINSVSPAVRGPIAEQFAEALKASV : UniRef90_E1SQL8
UniRef90_C4LC73 : YSTEQIESLMQELQGVLQAHNASVDLGLLALGNLATHIINQVPEALRADVASSFAQALQQSI : UniRef90_C4LC73
UniRef90_W7QHZ7 : FSDQDLDRVVSALKIALSVQKVPANLSLVALGTLVSEVIEQFPQENQKAIAENFAKALQDSI : UniRef90_W7QHZ7
UniRef90_S6EMJ6 : FQDKQVDTLLNELIAVFEKHQTPVDLSLVVLGN----------------------------- : UniRef90_S6EMJ6
: 1---------11--------21--------31--------41--------51--------61 :
OrigSeq : YSNERVEKIIQDLLDVLVKEEVTPDLALMCLGNAVTNIIAQVPESKRVAVVDNFTKALKQSV : OrigSeq
Jnet : --HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH-- : Jnet
jhmm : --HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-- : jhmm
jpssm : --HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH-- : jpssm
Lupas 14 : -------------------------------------------------------------- : Lupas 14
Lupas 21 : -------------------------------------------------------------- : Lupas 21
Lupas 28 : -------------------------------------------------------------- : Lupas 28
Jnet_25 : -----B--BB--BB-BB----B---BBBBBBBBBBBBBB--B----B--BB--BB-BB--B- : Jnet_25
Jnet_5 : --------BB--B--BB--------BBBBBBB-BBB-BB----------BB--B---B---- : Jnet_5
Jnet_0 : ------------B-------------BB-BB---B----------------------B---- : Jnet_0
Jnet Rel : 97589999999999998742787213788999999987408866899999999999988518 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.