SILENT_MODE BLOCK_FILE jp_5y6Hy78.concise.blc MAX_NSEQ 1120 MAX_INPUT_LEN 1122 OUTPUT_FILE jp_5y6Hy78.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 160 1109 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1110 160 1119 H SPACE SUB_CHARS 1 1110 160 1119 E SPACE SUB_CHARS 1 1110 160 1119 - SPACE HELIX 25 1113 40 COLOUR_TEXT_REGION 25 1113 40 1113 50 HELIX 47 1113 59 COLOUR_TEXT_REGION 47 1113 59 1113 50 HELIX 64 1113 72 COLOUR_TEXT_REGION 64 1113 72 1113 50 HELIX 79 1113 84 COLOUR_TEXT_REGION 79 1113 84 1113 50 HELIX 90 1113 106 COLOUR_TEXT_REGION 90 1113 106 1113 50 HELIX 112 1113 124 COLOUR_TEXT_REGION 112 1113 124 1113 50 HELIX 129 1113 152 COLOUR_TEXT_REGION 129 1113 152 1113 50 HELIX 25 1118 40 COLOUR_TEXT_REGION 25 1118 40 1118 50 HELIX 47 1118 59 COLOUR_TEXT_REGION 47 1118 59 1118 50 HELIX 64 1118 73 COLOUR_TEXT_REGION 64 1118 73 1118 50 HELIX 80 1118 84 COLOUR_TEXT_REGION 80 1118 84 1118 50 HELIX 90 1118 106 COLOUR_TEXT_REGION 90 1118 106 1118 50 HELIX 112 1118 124 COLOUR_TEXT_REGION 112 1118 124 1118 50 HELIX 129 1118 151 COLOUR_TEXT_REGION 129 1118 151 1118 50 HELIX 11 1119 15 COLOUR_TEXT_REGION 11 1119 15 1119 50 HELIX 25 1119 40 COLOUR_TEXT_REGION 25 1119 40 1119 50 HELIX 47 1119 59 COLOUR_TEXT_REGION 47 1119 59 1119 50 HELIX 64 1119 71 COLOUR_TEXT_REGION 64 1119 71 1119 50 HELIX 78 1119 84 COLOUR_TEXT_REGION 78 1119 84 1119 50 HELIX 90 1119 106 COLOUR_TEXT_REGION 90 1119 106 1119 50 HELIX 112 1119 124 COLOUR_TEXT_REGION 112 1119 124 1119 50 HELIX 129 1119 153 COLOUR_TEXT_REGION 129 1119 153 1119 50