SILENT_MODE BLOCK_FILE jp_ZQNWIEZ.concise.blc MAX_NSEQ 880 MAX_INPUT_LEN 882 OUTPUT_FILE jp_ZQNWIEZ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 130 869 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 870 130 879 H SPACE SUB_CHARS 1 870 130 879 E SPACE SUB_CHARS 1 870 130 879 - SPACE HELIX 3 873 15 COLOUR_TEXT_REGION 3 873 15 873 50 HELIX 18 873 26 COLOUR_TEXT_REGION 18 873 26 873 50 HELIX 30 873 38 COLOUR_TEXT_REGION 30 873 38 873 50 HELIX 42 873 51 COLOUR_TEXT_REGION 42 873 51 873 50 HELIX 55 873 62 COLOUR_TEXT_REGION 55 873 62 873 50 HELIX 68 873 76 COLOUR_TEXT_REGION 68 873 76 873 50 HELIX 80 873 88 COLOUR_TEXT_REGION 80 873 88 873 50 HELIX 93 873 100 COLOUR_TEXT_REGION 93 873 100 873 50 HELIX 104 873 112 COLOUR_TEXT_REGION 104 873 112 873 50 HELIX 116 873 126 COLOUR_TEXT_REGION 116 873 126 873 50 HELIX 3 878 15 COLOUR_TEXT_REGION 3 878 15 878 50 HELIX 18 878 26 COLOUR_TEXT_REGION 18 878 26 878 50 HELIX 30 878 38 COLOUR_TEXT_REGION 30 878 38 878 50 HELIX 42 878 51 COLOUR_TEXT_REGION 42 878 51 878 50 HELIX 55 878 62 COLOUR_TEXT_REGION 55 878 62 878 50 HELIX 68 878 76 COLOUR_TEXT_REGION 68 878 76 878 50 HELIX 80 878 88 COLOUR_TEXT_REGION 80 878 88 878 50 HELIX 93 878 100 COLOUR_TEXT_REGION 93 878 100 878 50 HELIX 104 878 112 COLOUR_TEXT_REGION 104 878 112 878 50 HELIX 116 878 126 COLOUR_TEXT_REGION 116 878 126 878 50 HELIX 2 879 15 COLOUR_TEXT_REGION 2 879 15 879 50 HELIX 17 879 26 COLOUR_TEXT_REGION 17 879 26 879 50 HELIX 30 879 38 COLOUR_TEXT_REGION 30 879 38 879 50 HELIX 42 879 51 COLOUR_TEXT_REGION 42 879 51 879 50 HELIX 55 879 62 COLOUR_TEXT_REGION 55 879 62 879 50 HELIX 68 879 76 COLOUR_TEXT_REGION 68 879 76 879 50 HELIX 80 879 88 COLOUR_TEXT_REGION 80 879 88 879 50 HELIX 93 879 100 COLOUR_TEXT_REGION 93 879 100 879 50 HELIX 104 879 112 COLOUR_TEXT_REGION 104 879 112 879 50 HELIX 116 879 126 COLOUR_TEXT_REGION 116 879 126 879 50