SILENT_MODE
BLOCK_FILE jp_g9e1TC7.concise.blc
MAX_NSEQ 837
MAX_INPUT_LEN 839
OUTPUT_FILE jp_g9e1TC7.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 143 826   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 827 143 836 H SPACE
SUB_CHARS 1 827 143 836 E SPACE
SUB_CHARS 1 827 143 836 - SPACE
STRAND 6 830 9
COLOUR_TEXT_REGION 6 830 9 830 51
STRAND 14 830 17
COLOUR_TEXT_REGION 14 830 17 830 51
STRAND 29 830 33
COLOUR_TEXT_REGION 29 830 33 830 51
STRAND 45 830 47
COLOUR_TEXT_REGION 45 830 47 830 51
STRAND 63 830 69
COLOUR_TEXT_REGION 63 830 69 830 51
STRAND 72 830 72
COLOUR_TEXT_REGION 72 830 72 830 51
STRAND 78 830 80
COLOUR_TEXT_REGION 78 830 80 830 51
STRAND 84 830 87
COLOUR_TEXT_REGION 84 830 87 830 51
STRAND 98 830 105
COLOUR_TEXT_REGION 98 830 105 830 51
STRAND 108 830 113
COLOUR_TEXT_REGION 108 830 113 830 51
STRAND 129 830 134
COLOUR_TEXT_REGION 129 830 134 830 51
STRAND 5 835 9
COLOUR_TEXT_REGION 5 835 9 835 51
STRAND 14 835 17
COLOUR_TEXT_REGION 14 835 17 835 51
STRAND 29 835 32
COLOUR_TEXT_REGION 29 835 32 835 51
STRAND 45 835 47
COLOUR_TEXT_REGION 45 835 47 835 51
STRAND 63 835 69
COLOUR_TEXT_REGION 63 835 69 835 51
STRAND 78 835 80
COLOUR_TEXT_REGION 78 835 80 835 51
STRAND 84 835 87
COLOUR_TEXT_REGION 84 835 87 835 51
STRAND 97 835 105
COLOUR_TEXT_REGION 97 835 105 835 51
STRAND 108 835 113
COLOUR_TEXT_REGION 108 835 113 835 51
STRAND 129 835 134
COLOUR_TEXT_REGION 129 835 134 835 51
STRAND 8 836 9
COLOUR_TEXT_REGION 8 836 9 836 51
STRAND 13 836 17
COLOUR_TEXT_REGION 13 836 17 836 51
STRAND 21 836 23
COLOUR_TEXT_REGION 21 836 23 836 51
STRAND 29 836 34
COLOUR_TEXT_REGION 29 836 34 836 51
STRAND 46 836 48
COLOUR_TEXT_REGION 46 836 48 836 51
STRAND 64 836 69
COLOUR_TEXT_REGION 64 836 69 836 51
STRAND 72 836 72
COLOUR_TEXT_REGION 72 836 72 836 51
STRAND 78 836 80
COLOUR_TEXT_REGION 78 836 80 836 51
STRAND 84 836 88
COLOUR_TEXT_REGION 84 836 88 836 51
STRAND 98 836 104
COLOUR_TEXT_REGION 98 836 104 836 51
STRAND 109 836 113
COLOUR_TEXT_REGION 109 836 113 836 51
STRAND 129 836 133
COLOUR_TEXT_REGION 129 836 133 836 51