SILENT_MODE BLOCK_FILE jp_cFEfg85.concise.blc MAX_NSEQ 875 MAX_INPUT_LEN 877 OUTPUT_FILE jp_cFEfg85.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 461 864 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 865 461 874 H SPACE SUB_CHARS 1 865 461 874 E SPACE SUB_CHARS 1 865 461 874 - SPACE STRAND 4 868 5 COLOUR_TEXT_REGION 4 868 5 868 51 STRAND 67 868 69 COLOUR_TEXT_REGION 67 868 69 868 51 STRAND 88 868 94 COLOUR_TEXT_REGION 88 868 94 868 51 STRAND 100 868 105 COLOUR_TEXT_REGION 100 868 105 868 51 STRAND 111 868 115 COLOUR_TEXT_REGION 111 868 115 868 51 STRAND 138 868 143 COLOUR_TEXT_REGION 138 868 143 868 51 STRAND 155 868 160 COLOUR_TEXT_REGION 155 868 160 868 51 STRAND 164 868 171 COLOUR_TEXT_REGION 164 868 171 868 51 STRAND 188 868 191 COLOUR_TEXT_REGION 188 868 191 868 51 STRAND 340 868 346 COLOUR_TEXT_REGION 340 868 346 868 51 STRAND 359 868 364 COLOUR_TEXT_REGION 359 868 364 868 51 STRAND 373 868 379 COLOUR_TEXT_REGION 373 868 379 868 51 STRAND 386 868 386 COLOUR_TEXT_REGION 386 868 386 868 51 STRAND 410 868 414 COLOUR_TEXT_REGION 410 868 414 868 51 STRAND 426 868 428 COLOUR_TEXT_REGION 426 868 428 868 51 STRAND 435 868 441 COLOUR_TEXT_REGION 435 868 441 868 51 HELIX 21 868 58 COLOUR_TEXT_REGION 21 868 58 868 50 HELIX 177 868 186 COLOUR_TEXT_REGION 177 868 186 868 50 HELIX 218 868 230 COLOUR_TEXT_REGION 218 868 230 868 50 HELIX 239 868 248 COLOUR_TEXT_REGION 239 868 248 868 50 HELIX 261 868 282 COLOUR_TEXT_REGION 261 868 282 868 50 HELIX 320 868 329 COLOUR_TEXT_REGION 320 868 329 868 50 HELIX 446 868 448 COLOUR_TEXT_REGION 446 868 448 868 50 STRAND 4 873 5 COLOUR_TEXT_REGION 4 873 5 873 51 STRAND 67 873 69 COLOUR_TEXT_REGION 67 873 69 873 51 STRAND 89 873 94 COLOUR_TEXT_REGION 89 873 94 873 51 STRAND 100 873 105 COLOUR_TEXT_REGION 100 873 105 873 51 STRAND 112 873 115 COLOUR_TEXT_REGION 112 873 115 873 51 STRAND 138 873 142 COLOUR_TEXT_REGION 138 873 142 873 51 STRAND 155 873 160 COLOUR_TEXT_REGION 155 873 160 873 51 STRAND 164 873 171 COLOUR_TEXT_REGION 164 873 171 873 51 STRAND 188 873 191 COLOUR_TEXT_REGION 188 873 191 873 51 STRAND 297 873 298 COLOUR_TEXT_REGION 297 873 298 873 51 STRAND 339 873 347 COLOUR_TEXT_REGION 339 873 347 873 51 STRAND 360 873 363 COLOUR_TEXT_REGION 360 873 363 873 51 STRAND 374 873 379 COLOUR_TEXT_REGION 374 873 379 873 51 STRAND 385 873 386 COLOUR_TEXT_REGION 385 873 386 873 51 STRAND 410 873 414 COLOUR_TEXT_REGION 410 873 414 873 51 STRAND 426 873 428 COLOUR_TEXT_REGION 426 873 428 873 51 STRAND 435 873 441 COLOUR_TEXT_REGION 435 873 441 873 51 HELIX 21 873 57 COLOUR_TEXT_REGION 21 873 57 873 50 HELIX 116 873 116 COLOUR_TEXT_REGION 116 873 116 873 50 HELIX 118 873 119 COLOUR_TEXT_REGION 118 873 119 873 50 HELIX 177 873 186 COLOUR_TEXT_REGION 177 873 186 873 50 HELIX 218 873 230 COLOUR_TEXT_REGION 218 873 230 873 50 HELIX 239 873 247 COLOUR_TEXT_REGION 239 873 247 873 50 HELIX 261 873 282 COLOUR_TEXT_REGION 261 873 282 873 50 HELIX 320 873 329 COLOUR_TEXT_REGION 320 873 329 873 50 HELIX 446 873 449 COLOUR_TEXT_REGION 446 873 449 873 50 STRAND 4 874 5 COLOUR_TEXT_REGION 4 874 5 874 51 STRAND 68 874 69 COLOUR_TEXT_REGION 68 874 69 874 51 STRAND 87 874 94 COLOUR_TEXT_REGION 87 874 94 874 51 STRAND 100 874 105 COLOUR_TEXT_REGION 100 874 105 874 51 STRAND 111 874 116 COLOUR_TEXT_REGION 111 874 116 874 51 STRAND 138 874 143 COLOUR_TEXT_REGION 138 874 143 874 51 STRAND 155 874 159 COLOUR_TEXT_REGION 155 874 159 874 51 STRAND 164 874 170 COLOUR_TEXT_REGION 164 874 170 874 51 STRAND 188 874 191 COLOUR_TEXT_REGION 188 874 191 874 51 STRAND 341 874 346 COLOUR_TEXT_REGION 341 874 346 874 51 STRAND 353 874 353 COLOUR_TEXT_REGION 353 874 353 874 51 STRAND 359 874 364 COLOUR_TEXT_REGION 359 874 364 874 51 STRAND 372 874 379 COLOUR_TEXT_REGION 372 874 379 874 51 STRAND 402 874 404 COLOUR_TEXT_REGION 402 874 404 874 51 STRAND 409 874 415 COLOUR_TEXT_REGION 409 874 415 874 51 STRAND 426 874 429 COLOUR_TEXT_REGION 426 874 429 874 51 STRAND 436 874 441 COLOUR_TEXT_REGION 436 874 441 874 51 HELIX 21 874 58 COLOUR_TEXT_REGION 21 874 58 874 50 HELIX 177 874 187 COLOUR_TEXT_REGION 177 874 187 874 50 HELIX 219 874 230 COLOUR_TEXT_REGION 219 874 230 874 50 HELIX 239 874 248 COLOUR_TEXT_REGION 239 874 248 874 50 HELIX 262 874 282 COLOUR_TEXT_REGION 262 874 282 874 50 HELIX 320 874 329 COLOUR_TEXT_REGION 320 874 329 874 50 HELIX 447 874 448 COLOUR_TEXT_REGION 447 874 448 874 50