SILENT_MODE BLOCK_FILE jp_H0MR_dj.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_H0MR_dj.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 241 14 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 15 241 24 H SPACE SUB_CHARS 1 15 241 24 E SPACE SUB_CHARS 1 15 241 24 - SPACE STRAND 3 18 9 COLOUR_TEXT_REGION 3 18 9 18 51 STRAND 58 18 64 COLOUR_TEXT_REGION 58 18 64 18 51 STRAND 89 18 98 COLOUR_TEXT_REGION 89 18 98 18 51 STRAND 116 18 119 COLOUR_TEXT_REGION 116 18 119 18 51 STRAND 123 18 135 COLOUR_TEXT_REGION 123 18 135 18 51 HELIX 16 18 25 COLOUR_TEXT_REGION 16 18 25 18 50 HELIX 49 18 53 COLOUR_TEXT_REGION 49 18 53 18 50 HELIX 71 18 84 COLOUR_TEXT_REGION 71 18 84 18 50 HELIX 103 18 112 COLOUR_TEXT_REGION 103 18 112 18 50 HELIX 150 18 162 COLOUR_TEXT_REGION 150 18 162 18 50 HELIX 165 18 180 COLOUR_TEXT_REGION 165 18 180 18 50 HELIX 187 18 196 COLOUR_TEXT_REGION 187 18 196 18 50 HELIX 203 18 218 COLOUR_TEXT_REGION 203 18 218 18 50 HELIX 220 18 230 COLOUR_TEXT_REGION 220 18 230 18 50 HELIX 232 18 239 COLOUR_TEXT_REGION 232 18 239 18 50 STRAND 2 23 9 COLOUR_TEXT_REGION 2 23 9 23 51 STRAND 53 23 53 COLOUR_TEXT_REGION 53 23 53 23 51 STRAND 58 23 64 COLOUR_TEXT_REGION 58 23 64 23 51 STRAND 89 23 97 COLOUR_TEXT_REGION 89 23 97 23 51 STRAND 116 23 119 COLOUR_TEXT_REGION 116 23 119 23 51 STRAND 123 23 135 COLOUR_TEXT_REGION 123 23 135 23 51 HELIX 17 23 25 COLOUR_TEXT_REGION 17 23 25 23 50 HELIX 49 23 52 COLOUR_TEXT_REGION 49 23 52 23 50 HELIX 71 23 84 COLOUR_TEXT_REGION 71 23 84 23 50 HELIX 103 23 112 COLOUR_TEXT_REGION 103 23 112 23 50 HELIX 150 23 162 COLOUR_TEXT_REGION 150 23 162 23 50 HELIX 165 23 179 COLOUR_TEXT_REGION 165 23 179 23 50 HELIX 188 23 196 COLOUR_TEXT_REGION 188 23 196 23 50 HELIX 203 23 218 COLOUR_TEXT_REGION 203 23 218 23 50 HELIX 220 23 239 COLOUR_TEXT_REGION 220 23 239 23 50 STRAND 3 24 8 COLOUR_TEXT_REGION 3 24 8 24 51 STRAND 58 24 64 COLOUR_TEXT_REGION 58 24 64 24 51 STRAND 88 24 98 COLOUR_TEXT_REGION 88 24 98 24 51 STRAND 117 24 119 COLOUR_TEXT_REGION 117 24 119 24 51 STRAND 123 24 127 COLOUR_TEXT_REGION 123 24 127 24 51 STRAND 129 24 135 COLOUR_TEXT_REGION 129 24 135 24 51 HELIX 13 24 26 COLOUR_TEXT_REGION 13 24 26 24 50 HELIX 49 24 53 COLOUR_TEXT_REGION 49 24 53 24 50 HELIX 71 24 84 COLOUR_TEXT_REGION 71 24 84 24 50 HELIX 102 24 112 COLOUR_TEXT_REGION 102 24 112 24 50 HELIX 150 24 163 COLOUR_TEXT_REGION 150 24 163 24 50 HELIX 165 24 181 COLOUR_TEXT_REGION 165 24 181 24 50 HELIX 187 24 196 COLOUR_TEXT_REGION 187 24 196 24 50 HELIX 203 24 218 COLOUR_TEXT_REGION 203 24 218 24 50 HELIX 220 24 230 COLOUR_TEXT_REGION 220 24 230 24 50 HELIX 232 24 239 COLOUR_TEXT_REGION 232 24 239 24 50