QUERY                  : MFSEPIGVSVDGYPGIAIVVKNPPEFKSIELRDEAIKFDAKGAMILTVKDNEIVFPEDFRPLKEMYPEVAKKIVDYEDGDAVIITWAETPAKALKSAIHVAYILKKEEITPEILEVV : QUERY 
UniRef90_Q5JDB2        : LFSEAHFVGVDGMPAYAIVVKNPPQFKSIELRDEAIRFFAKGAMILIVKNGEPVFPEDERPLRDTMEELAEEVLNFSDGDLIVVTWAENPSDAMKSAYHVALTLKNDEIPEELKSLV : UniRef90_Q5JDB2
UniRef90_I6UZ03        : LFSEPIEVTVDGFPGVAIIVKNPGGFKSLELRDEAIKFDAKGAMILTVKNGEIVFPEDSRPLKEMYPEIVKRLYDYEEGDLIVITWADKIGRALKAALHVAVVLKGDQLPREILEV- : UniRef90_I6UZ03
UniRef90_C5A1T0        : -FSEVCRVGVEGFPAYAIIVKNPPEFKSIELRDEAIRFFAKGAMILVVKNGEVVFPEDGRPLRETMPELAERLLKPEEGDMVVVTWAENPADAMKSAYHVALFLKEDLIPEQLKGLV : UniRef90_C5A1T0
UniRef90_I3ZVD8        : -FSEVHKVGVDGYPAHAILVKNPPEFKSIELRDEAVRFFAKGAMILVVKNGEPVFPEDERPLSETMPGLAGEIFNLEDNDLVVVTWAEKEADAMKSAYHVALTLKEGELPEEIRSLV : UniRef90_I3ZVD8
UniRef90_W0I3T1        : LFSEPVEVKVENMPTYALLVKNPPQFKSIELRDEAIRYFARGAMILVCRNGEIVFPEDGRSLKETLPKLAEKKLNPEEGDLIVVTWAEDKADAIKSAIHVALTLKKSELPKEILEV- : UniRef90_W0I3T1
UniRef90_I3RDM6        : LFSEPIEIKVENFPAFAVVVKNPGEFKSIELRDEAIRFDAKGAMILIVKDGDIVFPEDLRPLKETYPEIVEKLSGYKEGDAIVIAWADSPGKALRAAIHVALVMKEDSIPQELMEVI : UniRef90_I3RDM6
UniRef90_B6YXC5        : -FSEVQKIGVEDYPAYALIVKDPPEFKSIELRDEAIRFFAKGAMILVVKKGEPVFPEDSRPLSDTMPELAEKLFQLEESDLIVVTWAEKEPEAMKSAYHVALFLKGEELPEDIQCLV : UniRef90_B6YXC5
UniRef90_H3ZK98        : LFSEPLEVTLEGFVTYALVVRNPPEFKSIELRDEAIRFFAKGAMILTVQNGEIVFPEDGRPLRETLPELSEDLKKLENGDLVIVTWAENKADALKSLIHVALSLKGELLPEEIKKLV : UniRef90_H3ZK98
UniRef90_F8AGM3        : -FSEPVPLSVDGYPACGIVIRRPGPFKSLELRDEAIRFRARGALILLMKDGKIVFPEDERPLADTYPELDAEILSPEGGDLVVVTWADEPPWAFKSAIHVALFLKGGKIPGELKEVI : UniRef90_F8AGM3
UniRef90_C6A441        : LFSEPVEVSIEDFLAYAIVVKDPPQFKSIELRDEAIRFFARGAMILRYLNGEVIFPEDNRPLKETLPEIAEDLLPLEDGDLIVITWAENRIDAVKSAIHVALVLKGEQIPVEIRKL- : UniRef90_C6A441
UniRef90_F9CWW0        : ---------IQGKYNHAILLKKYAEMTGIEQRDYAILYGSSGCTTMIYKNEKLVFPGNERECDAKTKKYIIENLCPHEEDVIIISSSDDPFVAEISAKNAAL--------------- : UniRef90_F9CWW0
UniRef90_K0B608        : ----------QSKNNHAVILKKAAVNTGLEQRDYAIMYGSSGCITLVFKNDKFVFPEDKDCLDKKTKQILLEKLNPSDGDIVIISSSDDPFVAEISAKNSAL--------------- : UniRef90_K0B608
UniRef90_R9T5Y7        : ---------------CAVLVKGMAAHNGNEQRDEAVYSGAEGATSFVAKNGKLYYPCSNMSPDEETTACLKTAFNIRDGDVIIIGTAKKYRLAEQGAVTAALALEN----------- : UniRef90_R9T5Y7
UniRef90_K0BCP3        : -----------GKYNYAILLKKSKIGNGMQQRDYAILYGASDSLTLIFKNNEFIFPVDGRICEHKTKNALIDILKPENEDIVIITSSDDKFVAEISAINTALTLRNEK--------- : UniRef90_K0BCP3
UniRef90_M4YK26        : -----------GHYNCAVQVPRAAVKYGCEERDSAIKSGATGATTLICSNGMLMFPGNEYPVSAKAEKAIRNAFSLNNEDVIIIGTADTPEQAEEGAVTAGLELIGG---------- : UniRef90_M4YK26
UniRef90_V6AT36        : -----------GKFNHAILLKKYATKSGTEQRDFAIMYGATGATTIIFRDGRFTFPNDTADCDKNTKKTLCNFLKPENEDMIIITSANEPFVAEISAKNSAL--------------- : UniRef90_V6AT36
UniRef90_UPI0003683189 : -----------GQSSVAVQVKGMGIKSGMEQRDQAIMAGAEGATTVVVKGDKLIIPVDF-DLDKDRPEAARRLFDLNDGDVIIIGTSADLQRAEEGALAAAFEL------------- : UniRef90_UPI0003683189
UniRef90_X1L8P0        : -----------GKIDIATIVRGAAKKRGIEQRDEAIKVGAQGATVLVFKGGKLQFPDGFIKVEKKNSEIIIKTFKPREGDVIIIGTANDIVPAETGARAASRTLT------------ : UniRef90_X1L8P0
UniRef90_K0IEG8        : -----------GRFNYAVLVRGFAVRSGIEQRDAAIKMGATGATTLIFKEGKFVMPASTHDSLKKEPQVRREKLRPKEGDVVIIGSADSSEKAELAAKNAALL-------------- : UniRef90_K0IEG8
UniRef90_F3KJ78        : ------GVILQCKFNHAILIKNYSKMTGLEQRDYAILYGSEGCITVVCKNKKLIFPEDKECFDNKTREYILEKLSPDEGDVIIISSSDDPFVAEISAKNSAL--------------- : UniRef90_F3KJ78
UniRef90_I3D4K2        : -----------GKHNCAIILRKTGIGNGMQQRDYAILYGASDSLTLRFKKEEFVFVGDEVVCFADEPEILIETLHPRNKDIVIITSSDDKFVAEISAINTAL--------------- : UniRef90_I3D4K2
UniRef90_K0I8K1        : -----------GKYNHAVLLKNLAVKSGIEQRDAAVKMGAIGATTLSFKDSKFVMPMDGYDSLEKEPNIRKEKLKPEEEDIVIIGSANDSRTAELAAKNAALV-------------- : UniRef90_K0I8K1
UniRef90_R9T598        : ---------VHGRKGVAVQVKGVEDKSGMEQRDRAMIAGADGATTVLVKNGKLQIP-GGIDLEGIYPDTASKLFDLENGDIIIIGTASEYELAEEGAVTAALDL------------- : UniRef90_R9T598
UniRef90_UPI000366DCDF : ---------------CAVLVKGMAGRTGYEQRDDAARAGAVGATTFIARDGKLYFPDTEPDQNDVLP--LRSVFDIEDGDAVVVGTAHSYEAAEKGAVTAALAL------------- : UniRef90_UPI000366DCDF
UniRef90_M9SBH2        : -----------GAINCAVQVPRAANKVGCEERDNAIKSGAAGATTLIYSNGILMFPGNEYPLDIKSDKAVRAAFNLSNDDAIIIGTADTPEAAEEGAVSA----------------- : UniRef90_M9SBH2
UniRef90_M9SBP0        : --------SVVGDFTQGVIVYGASSKNGMQQRDAGIKAGAEGCTTIVIRDGKLMIPPDWN-MDEQTPELAYKITGITADDVIIVGGGSSKIAAVEAVLNAAFEL------------- : UniRef90_M9SBP0
UniRef90_M9SHL5        : ---------VIGEHSQGILVSGASEFNGIDQRDAGIRAGGDGCTTWVVSGGIIMLPDWNVDDKDPGFAAALRISCPIDGDVLIIGGGNSRRLAMMASATAALEL------------- : UniRef90_M9SHL5
UniRef90_M4YK62        : LFDINLGESVVGSHQQGVVVFGVSSKNGMQQRDAGIKAGASGCTTIVIRNGALMIPPDWN-MDEQTPELAAKIIGPE--DVIIVGSADSQISAVEASLNAAFDL------------- : UniRef90_M4YK62
UniRef90_A0RX25        : -----------GESSHAVMLRGCAGRSGVEQRDYAVMYGAGGAMTLVYKGGRYTFP-DGRDAAFPGGAIQGALLGPIDGDVLIIAAAGDSFTSEMAAKNSGLLTVQNGTPR------ : UniRef90_A0RX25
UniRef90_UPI000374035A : ------------EHNYCLVVADLSIKKGIEERDIAIRFGANVLITLVHKYNKLFFP-DGYEFNEEYKECSKYLFQFKDGDLVIISGSDNERGARNGAYAAFYNL------------- : UniRef90_UPI000374035A
UniRef90_X1MPL3        : --------------NIATVVRGAAAMRGIEQRDDAIKVGADGATVLIFKRGRLRFPDGFFEVKKAASDALLRVLRPREGDIVVIGTASDAVKA------------------------ : UniRef90_X1MPL3
UniRef90_A1RW52        : ---EAVYVLLHGYPPAENVVK---------LRDEAVREGADGAVIAVFDGGKFRLPPGGEDLCSYAPRLCGEVLGAEEEDCLLVVFGERLGAAVKGLVGILLSEK------------ : UniRef90_A1RW52
UniRef90_UPI00036E784E : -------------CSVGLSVREGARIRGLEERDEAVRHGAEAAMVLVYRSGRILMPE-LEDITSRYPHISERIIRPVENDCIIIAGASYCMRAESGALGAALSL------------- : UniRef90_UPI00036E784E
UniRef90_X1HP73        : ---EDIIIKSEGYNPCFCLVRNESNKNGIEQRDAAIKIGGVGATCLIFNGRDLIFPKDQMRVANTTFNYIVNLFDLEENDVVIIGLDENPEK------------------------- : UniRef90_X1HP73
UniRef90_M9SBM1        : --------SAIGTYQVALLLKGKAKMKGVEQRNAALKSGGDGCTTIILRDGELVLPPDW-SIDEHSPELAAQIHGMEEGDVVLIGGSNTGRR------------------------- : UniRef90_M9SBM1
UniRef90_R9T642        : ------YVGIPNQCCCGIIVKQSSKIQGIRQRDICIKSGANGCITFILKDGKLTIPP-GRNLDEEYSDSLKKILCLAEGDVLILSYSVDE--------------------------- : UniRef90_R9T642
UniRef90_X0TK96        : ----DIIIETERLYTYFCLIKNAVHKNGVSQRDAAIKISGSGATCLVFNGEDLIFPSKSEPIDNDMSELSKENIKLEKNDVIAIGSGDNPQKARLATLNAALTL------------- : UniRef90_X0TK96
UniRef90_E6N5L5        : --------------NYGLVVKGLAERTGLEERDEAVRHGASAAMVLTFLSDGVHMPRVSN-LSVERPEFAEQVFKPEVGDVIIITGAEDEPRAMYS--------------------- : UniRef90_E6N5L5
UniRef90_B1L5G1        : ----------------------------LDLRDEAVRFGGKGALIFAVRGKRVIFPETGEDLSIYAPNDSKLLLGASDGDLIIIGLSEDPQISKLSSLGASLL-------------- : UniRef90_B1L5G1
UniRef90_H5SLS7        : ------------------QVRGAAEFPAWLYRDIAIREGATAALFLTKRKGALCFIEGSEPLAKKNPHDNEFLEQLSEGDLILIVFGPTKGAAARGLWAVLWAL------------- : UniRef90_H5SLS7
UniRef90_G7VDT6        : -----------GRRCVAHVVRGALG-DVIKIRDSLVRLGACGALIIEKKGGKTYLPPIGEPLEKYHANLAKKLEHHIAQDTVVITCGDTFADAL----------------------- : UniRef90_G7VDT6
UniRef90_UPI0003779562 : LENEKLGRLVLSKKNYCIVLKNLKVKSGVEERDIALKFGSEALLSIIYKNEKFMFP-DGYELNLEYEGACKYLKDLKEG-LIIISFSNNERDAINGAYAV----------------- : UniRef90_UPI0003779562
UniRef90_E0SR06        : -------------------------------RDMAIRNGAKAALVIFIKNSKAYLPPDESINEERYKSLIKNFLDASEDDVIIVTFSDDRITAEKALYNTIVEL------------- : UniRef90_E0SR06
UniRef90_A3MTS5        : --------------------------NAVAMRDELVRLGACGALI-VEKQEDLVLPPTYEKLRKYIPQLAENLEHLSQGQSAVVTCGETYADAMSIQIRCKNLLTGDE--------- : UniRef90_A3MTS5
UniRef90_F2L4X8        : -------------------------------RDEVVRRGGCGAIIAYLKGGSIYIPLAERRLEDLDSDLASALRTLKEGDTLIVSCGDNFGQAM-APLDVVCVMK------------ : UniRef90_F2L4X8
UniRef90_B1YCZ0        : -----------------------GVKDVIGLRDSLVRLGACGALIAVPREGKLALPPLDDPLEKYDKRLAETLKPYEDGGSVVIACGDTFSDAL----------------------- : UniRef90_B1YCZ0
UniRef90_X1AE64        : -------------------VRRLMKHNGIVARDAAIKINGSGATCLIYNGKDIYFPKASSRNNEEKVKINQKILNYEPDDVIIIGSGNNPQKSRLATLNAALTL------------- : UniRef90_X1AE64
UniRef90_H6QDG5        : -------------------------------RDSLVRLGACGALILEKRGDRFFLPPLGESLESYDTALASLLKAKVAGDSVIISCGENYADAF----------------------- : UniRef90_H6QDG5
UniRef90_A1RV62        : ---EAREVLC-GKRCIAYVVDEY-VNDVLGLRDDLVRRGACGALIIVEKDGKLKIPPTEDSLERYSIALAKTLGAYSQGTTFVVVCGETFSDAL----------------------- : UniRef90_A1RV62
UniRef90_G4RKP6        : -------------------------------RDSVVRRGSCGIIIAQLRDNNIYIPLAEMRLEDLDPEMAGSIKGLSREDFLIISCGDNFGQAL-APLEVVCEM------------- : UniRef90_G4RKP6
UniRef90_Q8ZWP1        : -----------GKRCVAHVVEGE-VGDVLKTRDSLIRLGSCGVLIVESRGGNLLIPPIGEPLEHYDVALAEALKSRVRRDAVIVACGDTFAD------------------------- : UniRef90_Q8ZWP1
UniRef90_S5Z5Q3        : -----------------VLLRKESVSNVLKIRDQAVKEGADGAIIGIFSGDTFKLPPGNEDLCMYAPLFCTEIKPKIIGETLLAVFGDKKGKTIEGLVAILLS-------------- : UniRef90_S5Z5Q3
UniRef90_I0A1G9        : ------------------------------LRDSAIRWGAEGSIILQYCNMETNIPEDLSIRNEIEKEIKKELQKLENGLYIIIGYKEREMSVVYGILKTACEL------------- : UniRef90_I0A1G9
UniRef90_R7Q2J4        : --------------------KGYLMDSDIKYRDGAIMMGASVCMPFRMDGGKVTVPYYDAVQLEYLSELAERI-GMKDGDAGMLCGAASIQVASSAAFGGMLKLLG----------- : UniRef90_R7Q2J4
UniRef90_A0A031LPA6    : ------RIESINWDSVRIVLKNKAKYKITELRDIIIREGAK-ATLIVVKGKKGVIPPDEFALPGLLEEIKEKLLDCSSGDLIL---------------------------------- : UniRef90_A0A031LPA6

                       : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111---- :
OrigSeq                : MFSEPIGVSVDGYPGIAIVVKNPPEFKSIELRDEAIKFDAKGAMILTVKDNEIVFPEDFRPLKEMYPEVAKKIVDYEDGDAVIITWAETPAKALKSAIHVAYILKKEEITPEILEVV : OrigSeq

Jnet                   : -----EEEEE-----EEEEEE------HHHHHHHHHHH----EEEEEEE--EEEE---------HHHHHHHHHH------EEEEEE---HHHHHHHHHHHHHHH-----HHHHHH-- : Jnet
jhmm                   : -----EEEEE-----EEEEEE------HHHHHHHHHHH----EEEEEEE--EEEE-----------HHHHHHH-------EEEEEE---HHHHHHHHHHHHHHH-----HHHHHH-- : jhmm
jpssm                  : -----EEEEE-----EEEEEE------HHHHHHHHHHH----EEEEEE---EEEE--------HHHHHHHHHHH------EEEEE----HHHHHHHHHHHHHH------HHHHH--- : jpssm

Lupas 14               : --------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21               : --------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28               : --------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25                : -----B-B-B---BBBBBBB--B----BB-BBBBBB-BBB-BBBBBBB----BBBB-----B---BB-BB--BB-B---BBBBBBBB-----BB-BBBBBBBBB----BB--B---- : Jnet_25
Jnet_5                 : ---------B----BBBBBB-------B---B--BB---B-BBBBBB-----B-BB------------BB--B-------BBBBB-------B--BB--BB-----------B---- : Jnet_5
Jnet_0                 : ----------------B--B-------B------BB------BBBB-----------------------------------BBBB-------B--B---B----------------- : Jnet_0
Jnet Rel               : 999726888638884688860578875068999998625897178986264688536787640102999998704788844788616856899888887654306887425543289 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.