SILENT_MODE BLOCK_FILE jp_30ejS_g.concise.blc MAX_NSEQ 615 MAX_INPUT_LEN 617 OUTPUT_FILE jp_30ejS_g.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 248 604 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 605 248 614 H SPACE SUB_CHARS 1 605 248 614 E SPACE SUB_CHARS 1 605 248 614 - SPACE STRAND 2 608 6 COLOUR_TEXT_REGION 2 608 6 608 51 STRAND 34 608 40 COLOUR_TEXT_REGION 34 608 40 608 51 STRAND 49 608 51 COLOUR_TEXT_REGION 49 608 51 608 51 STRAND 87 608 87 COLOUR_TEXT_REGION 87 608 87 608 51 STRAND 91 608 96 COLOUR_TEXT_REGION 91 608 96 608 51 STRAND 101 608 103 COLOUR_TEXT_REGION 101 608 103 608 51 STRAND 116 608 119 COLOUR_TEXT_REGION 116 608 119 608 51 STRAND 144 608 148 COLOUR_TEXT_REGION 144 608 148 608 51 STRAND 162 608 165 COLOUR_TEXT_REGION 162 608 165 608 51 STRAND 212 608 218 COLOUR_TEXT_REGION 212 608 218 608 51 STRAND 232 608 232 COLOUR_TEXT_REGION 232 608 232 608 51 HELIX 19 608 25 COLOUR_TEXT_REGION 19 608 25 608 50 HELIX 41 608 45 COLOUR_TEXT_REGION 41 608 45 608 50 HELIX 59 608 68 COLOUR_TEXT_REGION 59 608 68 608 50 HELIX 73 608 86 COLOUR_TEXT_REGION 73 608 86 608 50 HELIX 124 608 138 COLOUR_TEXT_REGION 124 608 138 608 50 HELIX 191 608 204 COLOUR_TEXT_REGION 191 608 204 608 50 HELIX 239 608 246 COLOUR_TEXT_REGION 239 608 246 608 50 STRAND 2 613 6 COLOUR_TEXT_REGION 2 613 6 613 51 STRAND 34 613 39 COLOUR_TEXT_REGION 34 613 39 613 51 STRAND 49 613 51 COLOUR_TEXT_REGION 49 613 51 613 51 STRAND 91 613 96 COLOUR_TEXT_REGION 91 613 96 613 51 STRAND 101 613 103 COLOUR_TEXT_REGION 101 613 103 613 51 STRAND 116 613 119 COLOUR_TEXT_REGION 116 613 119 613 51 STRAND 144 613 148 COLOUR_TEXT_REGION 144 613 148 613 51 STRAND 156 613 157 COLOUR_TEXT_REGION 156 613 157 613 51 STRAND 162 613 166 COLOUR_TEXT_REGION 162 613 166 613 51 STRAND 212 613 218 COLOUR_TEXT_REGION 212 613 218 613 51 STRAND 232 613 233 COLOUR_TEXT_REGION 232 613 233 613 51 HELIX 19 613 25 COLOUR_TEXT_REGION 19 613 25 613 50 HELIX 40 613 45 COLOUR_TEXT_REGION 40 613 45 613 50 HELIX 59 613 68 COLOUR_TEXT_REGION 59 613 68 613 50 HELIX 73 613 87 COLOUR_TEXT_REGION 73 613 87 613 50 HELIX 124 613 138 COLOUR_TEXT_REGION 124 613 138 613 50 HELIX 190 613 201 COLOUR_TEXT_REGION 190 613 201 613 50 HELIX 239 613 246 COLOUR_TEXT_REGION 239 613 246 613 50 STRAND 2 614 5 COLOUR_TEXT_REGION 2 614 5 614 51 STRAND 34 614 38 COLOUR_TEXT_REGION 34 614 38 614 51 STRAND 40 614 43 COLOUR_TEXT_REGION 40 614 43 614 51 STRAND 49 614 51 COLOUR_TEXT_REGION 49 614 51 614 51 STRAND 84 614 86 COLOUR_TEXT_REGION 84 614 86 614 51 STRAND 91 614 96 COLOUR_TEXT_REGION 91 614 96 614 51 STRAND 101 614 103 COLOUR_TEXT_REGION 101 614 103 614 51 STRAND 116 614 119 COLOUR_TEXT_REGION 116 614 119 614 51 STRAND 144 614 148 COLOUR_TEXT_REGION 144 614 148 614 51 STRAND 162 614 165 COLOUR_TEXT_REGION 162 614 165 614 51 STRAND 185 614 188 COLOUR_TEXT_REGION 185 614 188 614 51 STRAND 213 614 218 COLOUR_TEXT_REGION 213 614 218 614 51 HELIX 19 614 25 COLOUR_TEXT_REGION 19 614 25 614 50 HELIX 44 614 44 COLOUR_TEXT_REGION 44 614 44 614 50 HELIX 59 614 69 COLOUR_TEXT_REGION 59 614 69 614 50 HELIX 72 614 80 COLOUR_TEXT_REGION 72 614 80 614 50 HELIX 124 614 139 COLOUR_TEXT_REGION 124 614 139 614 50 HELIX 172 614 174 COLOUR_TEXT_REGION 172 614 174 614 50 HELIX 193 614 206 COLOUR_TEXT_REGION 193 614 206 614 50 HELIX 239 614 246 COLOUR_TEXT_REGION 239 614 246 614 50