SILENT_MODE BLOCK_FILE jp_hiUZhEb.concise.blc MAX_NSEQ 516 MAX_INPUT_LEN 518 OUTPUT_FILE jp_hiUZhEb.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 252 505 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 506 252 515 H SPACE SUB_CHARS 1 506 252 515 E SPACE SUB_CHARS 1 506 252 515 - SPACE STRAND 33 509 39 COLOUR_TEXT_REGION 33 509 39 509 51 STRAND 61 509 63 COLOUR_TEXT_REGION 61 509 63 509 51 STRAND 87 509 90 COLOUR_TEXT_REGION 87 509 90 509 51 STRAND 93 509 97 COLOUR_TEXT_REGION 93 509 97 509 51 STRAND 111 509 116 COLOUR_TEXT_REGION 111 509 116 509 51 STRAND 144 509 147 COLOUR_TEXT_REGION 144 509 147 509 51 STRAND 161 509 166 COLOUR_TEXT_REGION 161 509 166 509 51 STRAND 187 509 189 COLOUR_TEXT_REGION 187 509 189 509 51 STRAND 216 509 220 COLOUR_TEXT_REGION 216 509 220 509 51 STRAND 237 509 240 COLOUR_TEXT_REGION 237 509 240 509 51 STRAND 246 509 249 COLOUR_TEXT_REGION 246 509 249 509 51 HELIX 9 509 18 COLOUR_TEXT_REGION 9 509 18 509 50 HELIX 41 509 53 COLOUR_TEXT_REGION 41 509 53 509 50 HELIX 122 509 128 COLOUR_TEXT_REGION 122 509 128 509 50 HELIX 173 509 179 COLOUR_TEXT_REGION 173 509 179 509 50 HELIX 225 509 232 COLOUR_TEXT_REGION 225 509 232 509 50 STRAND 33 514 39 COLOUR_TEXT_REGION 33 514 39 514 51 STRAND 61 514 63 COLOUR_TEXT_REGION 61 514 63 514 51 STRAND 87 514 90 COLOUR_TEXT_REGION 87 514 90 514 51 STRAND 93 514 97 COLOUR_TEXT_REGION 93 514 97 514 51 STRAND 112 514 116 COLOUR_TEXT_REGION 112 514 116 514 51 STRAND 134 514 135 COLOUR_TEXT_REGION 134 514 135 514 51 STRAND 144 514 147 COLOUR_TEXT_REGION 144 514 147 514 51 STRAND 161 514 165 COLOUR_TEXT_REGION 161 514 165 514 51 STRAND 187 514 189 COLOUR_TEXT_REGION 187 514 189 514 51 STRAND 216 514 220 COLOUR_TEXT_REGION 216 514 220 514 51 STRAND 238 514 240 COLOUR_TEXT_REGION 238 514 240 514 51 STRAND 246 514 249 COLOUR_TEXT_REGION 246 514 249 514 51 HELIX 9 514 18 COLOUR_TEXT_REGION 9 514 18 514 50 HELIX 41 514 53 COLOUR_TEXT_REGION 41 514 53 514 50 HELIX 122 514 128 COLOUR_TEXT_REGION 122 514 128 514 50 HELIX 173 514 179 COLOUR_TEXT_REGION 173 514 179 514 50 HELIX 226 514 232 COLOUR_TEXT_REGION 226 514 232 514 50 STRAND 34 515 38 COLOUR_TEXT_REGION 34 515 38 515 51 STRAND 60 515 64 COLOUR_TEXT_REGION 60 515 64 515 51 STRAND 87 515 90 COLOUR_TEXT_REGION 87 515 90 515 51 STRAND 93 515 96 COLOUR_TEXT_REGION 93 515 96 515 51 STRAND 111 515 116 COLOUR_TEXT_REGION 111 515 116 515 51 STRAND 144 515 146 COLOUR_TEXT_REGION 144 515 146 515 51 STRAND 161 515 166 COLOUR_TEXT_REGION 161 515 166 515 51 STRAND 187 515 189 COLOUR_TEXT_REGION 187 515 189 515 51 STRAND 210 515 210 COLOUR_TEXT_REGION 210 515 210 515 51 STRAND 216 515 220 COLOUR_TEXT_REGION 216 515 220 515 51 STRAND 237 515 240 COLOUR_TEXT_REGION 237 515 240 515 51 STRAND 246 515 249 COLOUR_TEXT_REGION 246 515 249 515 51 HELIX 9 515 18 COLOUR_TEXT_REGION 9 515 18 515 50 HELIX 39 515 39 COLOUR_TEXT_REGION 39 515 39 515 50 HELIX 41 515 52 COLOUR_TEXT_REGION 41 515 52 515 50 HELIX 102 515 103 COLOUR_TEXT_REGION 102 515 103 515 50 HELIX 123 515 128 COLOUR_TEXT_REGION 123 515 128 515 50 HELIX 173 515 178 COLOUR_TEXT_REGION 173 515 178 515 50 HELIX 225 515 232 COLOUR_TEXT_REGION 225 515 232 515 50