SILENT_MODE BLOCK_FILE jp_jeOMGN9.concise.blc MAX_NSEQ 868 MAX_INPUT_LEN 870 OUTPUT_FILE jp_jeOMGN9.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 152 857 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 858 152 867 H SPACE SUB_CHARS 1 858 152 867 E SPACE SUB_CHARS 1 858 152 867 - SPACE STRAND 58 861 61 COLOUR_TEXT_REGION 58 861 61 861 51 STRAND 87 861 91 COLOUR_TEXT_REGION 87 861 91 861 51 STRAND 97 861 101 COLOUR_TEXT_REGION 97 861 101 861 51 STRAND 111 861 116 COLOUR_TEXT_REGION 111 861 116 861 51 STRAND 122 861 125 COLOUR_TEXT_REGION 122 861 125 861 51 HELIX 3 861 12 COLOUR_TEXT_REGION 3 861 12 861 50 HELIX 25 861 35 COLOUR_TEXT_REGION 25 861 35 861 50 HELIX 41 861 50 COLOUR_TEXT_REGION 41 861 50 861 50 HELIX 71 861 80 COLOUR_TEXT_REGION 71 861 80 861 50 HELIX 129 861 142 COLOUR_TEXT_REGION 129 861 142 861 50 HELIX 144 861 147 COLOUR_TEXT_REGION 144 861 147 861 50 STRAND 58 866 61 COLOUR_TEXT_REGION 58 866 61 866 51 STRAND 87 866 91 COLOUR_TEXT_REGION 87 866 91 866 51 STRAND 97 866 101 COLOUR_TEXT_REGION 97 866 101 866 51 STRAND 111 866 116 COLOUR_TEXT_REGION 111 866 116 866 51 STRAND 122 866 125 COLOUR_TEXT_REGION 122 866 125 866 51 HELIX 3 866 12 COLOUR_TEXT_REGION 3 866 12 866 50 HELIX 25 866 35 COLOUR_TEXT_REGION 25 866 35 866 50 HELIX 41 866 50 COLOUR_TEXT_REGION 41 866 50 866 50 HELIX 71 866 79 COLOUR_TEXT_REGION 71 866 79 866 50 HELIX 129 866 142 COLOUR_TEXT_REGION 129 866 142 866 50 STRAND 58 867 61 COLOUR_TEXT_REGION 58 867 61 867 51 STRAND 87 867 91 COLOUR_TEXT_REGION 87 867 91 867 51 STRAND 97 867 101 COLOUR_TEXT_REGION 97 867 101 867 51 STRAND 111 867 116 COLOUR_TEXT_REGION 111 867 116 867 51 STRAND 122 867 125 COLOUR_TEXT_REGION 122 867 125 867 51 HELIX 3 867 12 COLOUR_TEXT_REGION 3 867 12 867 50 HELIX 25 867 35 COLOUR_TEXT_REGION 25 867 35 867 50 HELIX 41 867 50 COLOUR_TEXT_REGION 41 867 50 867 50 HELIX 72 867 80 COLOUR_TEXT_REGION 72 867 80 867 50 HELIX 129 867 142 COLOUR_TEXT_REGION 129 867 142 867 50 HELIX 144 867 148 COLOUR_TEXT_REGION 144 867 148 867 50