SILENT_MODE BLOCK_FILE jp_4Ktw5gD.concise.blc MAX_NSEQ 212 MAX_INPUT_LEN 214 OUTPUT_FILE jp_4Ktw5gD.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 110 201 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 202 110 211 H SPACE SUB_CHARS 1 202 110 211 E SPACE SUB_CHARS 1 202 110 211 - SPACE STRAND 21 205 22 COLOUR_TEXT_REGION 21 205 22 205 51 STRAND 77 205 79 COLOUR_TEXT_REGION 77 205 79 205 51 HELIX 3 205 17 COLOUR_TEXT_REGION 3 205 17 205 50 HELIX 26 205 43 COLOUR_TEXT_REGION 26 205 43 205 50 HELIX 57 205 61 COLOUR_TEXT_REGION 57 205 61 205 50 HELIX 101 205 105 COLOUR_TEXT_REGION 101 205 105 205 50 STRAND 21 210 22 COLOUR_TEXT_REGION 21 210 22 210 51 STRAND 77 210 79 COLOUR_TEXT_REGION 77 210 79 210 51 HELIX 3 210 17 COLOUR_TEXT_REGION 3 210 17 210 50 HELIX 26 210 43 COLOUR_TEXT_REGION 26 210 43 210 50 HELIX 57 210 60 COLOUR_TEXT_REGION 57 210 60 210 50 HELIX 72 210 75 COLOUR_TEXT_REGION 72 210 75 210 50 HELIX 102 210 105 COLOUR_TEXT_REGION 102 210 105 210 50 STRAND 21 211 22 COLOUR_TEXT_REGION 21 211 22 211 51 STRAND 77 211 80 COLOUR_TEXT_REGION 77 211 80 211 51 STRAND 83 211 83 COLOUR_TEXT_REGION 83 211 83 211 51 HELIX 3 211 17 COLOUR_TEXT_REGION 3 211 17 211 50 HELIX 27 211 43 COLOUR_TEXT_REGION 27 211 43 211 50 HELIX 57 211 62 COLOUR_TEXT_REGION 57 211 62 211 50 HELIX 100 211 105 COLOUR_TEXT_REGION 100 211 105 211 50