SILENT_MODE BLOCK_FILE jp_oUVhqQQ.concise.blc MAX_NSEQ 763 MAX_INPUT_LEN 765 OUTPUT_FILE jp_oUVhqQQ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 176 752 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 753 176 762 H SPACE SUB_CHARS 1 753 176 762 E SPACE SUB_CHARS 1 753 176 762 - SPACE HELIX 3 756 12 COLOUR_TEXT_REGION 3 756 12 756 50 HELIX 25 756 35 COLOUR_TEXT_REGION 25 756 35 756 50 HELIX 49 756 61 COLOUR_TEXT_REGION 49 756 61 756 50 HELIX 67 756 93 COLOUR_TEXT_REGION 67 756 93 756 50 HELIX 97 756 113 COLOUR_TEXT_REGION 97 756 113 756 50 HELIX 129 756 137 COLOUR_TEXT_REGION 129 756 137 756 50 HELIX 143 756 147 COLOUR_TEXT_REGION 143 756 147 756 50 HELIX 151 756 158 COLOUR_TEXT_REGION 151 756 158 756 50 HELIX 163 756 173 COLOUR_TEXT_REGION 163 756 173 756 50 STRAND 122 761 123 COLOUR_TEXT_REGION 122 761 123 761 51 HELIX 3 761 11 COLOUR_TEXT_REGION 3 761 11 761 50 HELIX 25 761 35 COLOUR_TEXT_REGION 25 761 35 761 50 HELIX 49 761 61 COLOUR_TEXT_REGION 49 761 61 761 50 HELIX 68 761 93 COLOUR_TEXT_REGION 68 761 93 761 50 HELIX 97 761 112 COLOUR_TEXT_REGION 97 761 112 761 50 HELIX 129 761 137 COLOUR_TEXT_REGION 129 761 137 761 50 HELIX 143 761 147 COLOUR_TEXT_REGION 143 761 147 761 50 HELIX 151 761 158 COLOUR_TEXT_REGION 151 761 158 761 50 HELIX 163 761 174 COLOUR_TEXT_REGION 163 761 174 761 50 HELIX 3 762 16 COLOUR_TEXT_REGION 3 762 16 762 50 HELIX 25 762 35 COLOUR_TEXT_REGION 25 762 35 762 50 HELIX 49 762 60 COLOUR_TEXT_REGION 49 762 60 762 50 HELIX 67 762 93 COLOUR_TEXT_REGION 67 762 93 762 50 HELIX 97 762 113 COLOUR_TEXT_REGION 97 762 113 762 50 HELIX 129 762 137 COLOUR_TEXT_REGION 129 762 137 762 50 HELIX 144 762 146 COLOUR_TEXT_REGION 144 762 146 762 50 HELIX 151 762 158 COLOUR_TEXT_REGION 151 762 158 762 50 HELIX 162 762 173 COLOUR_TEXT_REGION 162 762 173 762 50