SILENT_MODE BLOCK_FILE jp_rwlLHbz.concise.blc MAX_NSEQ 101 MAX_INPUT_LEN 103 OUTPUT_FILE jp_rwlLHbz.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 130 90 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 91 130 100 H SPACE SUB_CHARS 1 91 130 100 E SPACE SUB_CHARS 1 91 130 100 - SPACE STRAND 44 94 50 COLOUR_TEXT_REGION 44 94 50 94 51 STRAND 82 94 86 COLOUR_TEXT_REGION 82 94 86 94 51 STRAND 92 94 97 COLOUR_TEXT_REGION 92 94 97 94 51 STRAND 104 94 110 COLOUR_TEXT_REGION 104 94 110 94 51 HELIX 4 94 14 COLOUR_TEXT_REGION 4 94 14 94 50 HELIX 25 94 40 COLOUR_TEXT_REGION 25 94 40 94 50 HELIX 54 94 68 COLOUR_TEXT_REGION 54 94 68 94 50 STRAND 44 99 50 COLOUR_TEXT_REGION 44 99 50 99 51 STRAND 82 99 86 COLOUR_TEXT_REGION 82 99 86 99 51 STRAND 92 99 96 COLOUR_TEXT_REGION 92 99 96 99 51 STRAND 104 99 110 COLOUR_TEXT_REGION 104 99 110 99 51 STRAND 119 99 121 COLOUR_TEXT_REGION 119 99 121 99 51 HELIX 4 99 14 COLOUR_TEXT_REGION 4 99 14 99 50 HELIX 25 99 40 COLOUR_TEXT_REGION 25 99 40 99 50 HELIX 54 99 68 COLOUR_TEXT_REGION 54 99 68 99 50 STRAND 44 100 49 COLOUR_TEXT_REGION 44 100 49 100 51 STRAND 82 100 86 COLOUR_TEXT_REGION 82 100 86 100 51 STRAND 92 100 97 COLOUR_TEXT_REGION 92 100 97 100 51 STRAND 104 100 110 COLOUR_TEXT_REGION 104 100 110 100 51 HELIX 4 100 13 COLOUR_TEXT_REGION 4 100 13 100 50 HELIX 25 100 40 COLOUR_TEXT_REGION 25 100 40 100 50 HELIX 54 100 67 COLOUR_TEXT_REGION 54 100 67 100 50