SILENT_MODE BLOCK_FILE jp_XwecwDv.concise.blc MAX_NSEQ 693 MAX_INPUT_LEN 695 OUTPUT_FILE jp_XwecwDv.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 163 682 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 683 163 692 H SPACE SUB_CHARS 1 683 163 692 E SPACE SUB_CHARS 1 683 163 692 - SPACE STRAND 5 686 10 COLOUR_TEXT_REGION 5 686 10 686 51 STRAND 34 686 38 COLOUR_TEXT_REGION 34 686 38 686 51 STRAND 66 686 72 COLOUR_TEXT_REGION 66 686 72 686 51 STRAND 81 686 86 COLOUR_TEXT_REGION 81 686 86 686 51 STRAND 90 686 94 COLOUR_TEXT_REGION 90 686 94 686 51 STRAND 110 686 115 COLOUR_TEXT_REGION 110 686 115 686 51 HELIX 19 686 29 COLOUR_TEXT_REGION 19 686 29 686 50 HELIX 47 686 58 COLOUR_TEXT_REGION 47 686 58 686 50 HELIX 100 686 105 COLOUR_TEXT_REGION 100 686 105 686 50 HELIX 134 686 143 COLOUR_TEXT_REGION 134 686 143 686 50 STRAND 6 691 10 COLOUR_TEXT_REGION 6 691 10 691 51 STRAND 35 691 38 COLOUR_TEXT_REGION 35 691 38 691 51 STRAND 66 691 71 COLOUR_TEXT_REGION 66 691 71 691 51 STRAND 80 691 86 COLOUR_TEXT_REGION 80 691 86 691 51 STRAND 90 691 94 COLOUR_TEXT_REGION 90 691 94 691 51 STRAND 110 691 115 COLOUR_TEXT_REGION 110 691 115 691 51 HELIX 19 691 29 COLOUR_TEXT_REGION 19 691 29 691 50 HELIX 47 691 58 COLOUR_TEXT_REGION 47 691 58 691 50 HELIX 100 691 105 COLOUR_TEXT_REGION 100 691 105 691 50 HELIX 135 691 143 COLOUR_TEXT_REGION 135 691 143 691 50 HELIX 148 691 149 COLOUR_TEXT_REGION 148 691 149 691 50 STRAND 5 692 10 COLOUR_TEXT_REGION 5 692 10 692 51 STRAND 34 692 39 COLOUR_TEXT_REGION 34 692 39 692 51 STRAND 66 692 72 COLOUR_TEXT_REGION 66 692 72 692 51 STRAND 81 692 86 COLOUR_TEXT_REGION 81 692 86 692 51 STRAND 90 692 94 COLOUR_TEXT_REGION 90 692 94 692 51 STRAND 111 692 115 COLOUR_TEXT_REGION 111 692 115 692 51 STRAND 133 692 133 COLOUR_TEXT_REGION 133 692 133 692 51 HELIX 19 692 28 COLOUR_TEXT_REGION 19 692 28 692 50 HELIX 47 692 58 COLOUR_TEXT_REGION 47 692 58 692 50 HELIX 100 692 105 COLOUR_TEXT_REGION 100 692 105 692 50 HELIX 134 692 143 COLOUR_TEXT_REGION 134 692 143 692 50