SILENT_MODE
BLOCK_FILE jp_dtXb6Dp.concise.blc
MAX_NSEQ 778
MAX_INPUT_LEN 780
OUTPUT_FILE jp_dtXb6Dp.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 86 767   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 768 86 777 H SPACE
SUB_CHARS 1 768 86 777 E SPACE
SUB_CHARS 1 768 86 777 - SPACE
STRAND 2 771 7
COLOUR_TEXT_REGION 2 771 7 771 51
STRAND 12 771 15
COLOUR_TEXT_REGION 12 771 15 771 51
STRAND 27 771 31
COLOUR_TEXT_REGION 27 771 31 771 51
STRAND 35 771 40
COLOUR_TEXT_REGION 35 771 40 771 51
STRAND 51 771 55
COLOUR_TEXT_REGION 51 771 55 771 51
STRAND 60 771 65
COLOUR_TEXT_REGION 60 771 65 771 51
STRAND 81 771 84
COLOUR_TEXT_REGION 81 771 84 771 51
HELIX 70 771 73
COLOUR_TEXT_REGION 70 771 73 771 50
STRAND 2 776 7
COLOUR_TEXT_REGION 2 776 7 776 51
STRAND 12 776 15
COLOUR_TEXT_REGION 12 776 15 776 51
STRAND 27 776 31
COLOUR_TEXT_REGION 27 776 31 776 51
STRAND 34 776 40
COLOUR_TEXT_REGION 34 776 40 776 51
STRAND 51 776 55
COLOUR_TEXT_REGION 51 776 55 776 51
STRAND 60 776 65
COLOUR_TEXT_REGION 60 776 65 776 51
STRAND 81 776 84
COLOUR_TEXT_REGION 81 776 84 776 51
HELIX 70 776 73
COLOUR_TEXT_REGION 70 776 73 776 50
STRAND 2 777 7
COLOUR_TEXT_REGION 2 777 7 777 51
STRAND 12 777 16
COLOUR_TEXT_REGION 12 777 16 777 51
STRAND 26 777 31
COLOUR_TEXT_REGION 26 777 31 777 51
STRAND 35 777 40
COLOUR_TEXT_REGION 35 777 40 777 51
STRAND 51 777 55
COLOUR_TEXT_REGION 51 777 55 777 51
STRAND 60 777 66
COLOUR_TEXT_REGION 60 777 66 777 51
STRAND 81 777 84
COLOUR_TEXT_REGION 81 777 84 777 51
HELIX 70 777 73
COLOUR_TEXT_REGION 70 777 73 777 50