SILENT_MODE BLOCK_FILE jp_ZEKlPnC.concise.blc MAX_NSEQ 667 MAX_INPUT_LEN 669 OUTPUT_FILE jp_ZEKlPnC.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 392 656 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 657 392 666 H SPACE SUB_CHARS 1 657 392 666 E SPACE SUB_CHARS 1 657 392 666 - SPACE STRAND 3 660 7 COLOUR_TEXT_REGION 3 660 7 660 51 STRAND 14 660 20 COLOUR_TEXT_REGION 14 660 20 660 51 STRAND 56 660 64 COLOUR_TEXT_REGION 56 660 64 660 51 STRAND 67 660 68 COLOUR_TEXT_REGION 67 660 68 660 51 STRAND 73 660 79 COLOUR_TEXT_REGION 73 660 79 660 51 STRAND 119 660 120 COLOUR_TEXT_REGION 119 660 120 660 51 STRAND 162 660 170 COLOUR_TEXT_REGION 162 660 170 660 51 STRAND 173 660 174 COLOUR_TEXT_REGION 173 660 174 660 51 STRAND 221 660 228 COLOUR_TEXT_REGION 221 660 228 660 51 STRAND 260 660 263 COLOUR_TEXT_REGION 260 660 263 660 51 STRAND 280 660 283 COLOUR_TEXT_REGION 280 660 283 660 51 STRAND 288 660 291 COLOUR_TEXT_REGION 288 660 291 660 51 STRAND 308 660 314 COLOUR_TEXT_REGION 308 660 314 660 51 STRAND 334 660 339 COLOUR_TEXT_REGION 334 660 339 660 51 STRAND 345 660 347 COLOUR_TEXT_REGION 345 660 347 660 51 HELIX 30 660 40 COLOUR_TEXT_REGION 30 660 40 660 50 HELIX 118 660 118 COLOUR_TEXT_REGION 118 660 118 660 50 HELIX 121 660 123 COLOUR_TEXT_REGION 121 660 123 660 50 HELIX 138 660 157 COLOUR_TEXT_REGION 138 660 157 660 50 HELIX 183 660 189 COLOUR_TEXT_REGION 183 660 189 660 50 HELIX 199 660 215 COLOUR_TEXT_REGION 199 660 215 660 50 HELIX 244 660 253 COLOUR_TEXT_REGION 244 660 253 660 50 HELIX 325 660 325 COLOUR_TEXT_REGION 325 660 325 660 50 HELIX 352 660 370 COLOUR_TEXT_REGION 352 660 370 660 50 HELIX 375 660 390 COLOUR_TEXT_REGION 375 660 390 660 50 STRAND 3 665 7 COLOUR_TEXT_REGION 3 665 7 665 51 STRAND 14 665 20 COLOUR_TEXT_REGION 14 665 20 665 51 STRAND 56 665 64 COLOUR_TEXT_REGION 56 665 64 665 51 STRAND 72 665 79 COLOUR_TEXT_REGION 72 665 79 665 51 STRAND 118 665 122 COLOUR_TEXT_REGION 118 665 122 665 51 STRAND 162 665 170 COLOUR_TEXT_REGION 162 665 170 665 51 STRAND 221 665 228 COLOUR_TEXT_REGION 221 665 228 665 51 STRAND 260 665 263 COLOUR_TEXT_REGION 260 665 263 665 51 STRAND 280 665 283 COLOUR_TEXT_REGION 280 665 283 665 51 STRAND 288 665 292 COLOUR_TEXT_REGION 288 665 292 665 51 STRAND 299 665 301 COLOUR_TEXT_REGION 299 665 301 665 51 STRAND 308 665 314 COLOUR_TEXT_REGION 308 665 314 665 51 STRAND 334 665 339 COLOUR_TEXT_REGION 334 665 339 665 51 STRAND 345 665 348 COLOUR_TEXT_REGION 345 665 348 665 51 HELIX 30 665 39 COLOUR_TEXT_REGION 30 665 39 665 50 HELIX 138 665 157 COLOUR_TEXT_REGION 138 665 157 665 50 HELIX 183 665 190 COLOUR_TEXT_REGION 183 665 190 665 50 HELIX 199 665 215 COLOUR_TEXT_REGION 199 665 215 665 50 HELIX 244 665 253 COLOUR_TEXT_REGION 244 665 253 665 50 HELIX 265 665 269 COLOUR_TEXT_REGION 265 665 269 665 50 HELIX 352 665 370 COLOUR_TEXT_REGION 352 665 370 665 50 HELIX 375 665 390 COLOUR_TEXT_REGION 375 665 390 665 50 STRAND 3 666 7 COLOUR_TEXT_REGION 3 666 7 666 51 STRAND 14 666 20 COLOUR_TEXT_REGION 14 666 20 666 51 STRAND 56 666 60 COLOUR_TEXT_REGION 56 666 60 666 51 STRAND 67 666 68 COLOUR_TEXT_REGION 67 666 68 666 51 STRAND 73 666 78 COLOUR_TEXT_REGION 73 666 78 666 51 STRAND 162 666 170 COLOUR_TEXT_REGION 162 666 170 666 51 STRAND 173 666 175 COLOUR_TEXT_REGION 173 666 175 666 51 STRAND 221 666 228 COLOUR_TEXT_REGION 221 666 228 666 51 STRAND 259 666 263 COLOUR_TEXT_REGION 259 666 263 666 51 STRAND 280 666 283 COLOUR_TEXT_REGION 280 666 283 666 51 STRAND 289 666 289 COLOUR_TEXT_REGION 289 666 289 666 51 STRAND 308 666 313 COLOUR_TEXT_REGION 308 666 313 666 51 STRAND 334 666 340 COLOUR_TEXT_REGION 334 666 340 666 51 STRAND 345 666 345 COLOUR_TEXT_REGION 345 666 345 666 51 HELIX 30 666 40 COLOUR_TEXT_REGION 30 666 40 666 50 HELIX 118 666 123 COLOUR_TEXT_REGION 118 666 123 666 50 HELIX 138 666 157 COLOUR_TEXT_REGION 138 666 157 666 50 HELIX 199 666 215 COLOUR_TEXT_REGION 199 666 215 666 50 HELIX 244 666 253 COLOUR_TEXT_REGION 244 666 253 666 50 HELIX 322 666 328 COLOUR_TEXT_REGION 322 666 328 666 50 HELIX 350 666 370 COLOUR_TEXT_REGION 350 666 370 666 50 HELIX 375 666 390 COLOUR_TEXT_REGION 375 666 390 666 50