QUERY : VRVDQNLFNEVMYLLDELSQDITVPKNVRKVAQDSKAKLSQENESLDLRCATVLSMLDEMANDPNVPAHGRTDLYTIISKLEALS : QUERY
UniRef90_UPI000474A985 : --VDNTKLKQVIDVLDQLAEDTSVPRNIRRGATDAKDRLLQPNEAMDVKAASAIFILDELANDPNIPLHGRTLIWNIISQLETVK : UniRef90_UPI000474A985
UniRef90_A2BN84 : ---NEAKIRQAIMILMRIINDTAVPRNIRRAATEAIKQLRDESLSPGVRAANAISILDEISQDPNMPVYARTLIWNVITLLETV- : UniRef90_A2BN84
UniRef90_E0SRN7 : ---NEAKIKQALLVLSRVMNDPSIPRNIRRAAMFAIRALNEKGLSPGVRAANAVGILDEVSQDPNMPLHARTLLWSAITILETVK : UniRef90_E0SRN7
UniRef90_F6BES6 : --TPEEKLQQIAMMLDEIINDTTVPRNIRAAAEKAKETILKEGEEPIVKSATAIQILDDISDDPNMPLHTRTQIWSIVSELETVK : UniRef90_F6BES6
UniRef90_V4K267 : ----EDKIKFAMTILTTIVNDAAVPRNIRRAAATALTYLRDTRLSPGVRAANAIGALDEVSQDPNMPLHARTKIWQVLSMLETIK : UniRef90_V4K267
UniRef90_A0B954 : --MSEKVIKQCVEILERIMSDDTVPRNIRRSAENVKGILLQEGLAEAVKAASAISILDEISNDPNIPLHTRTLIWNVASQLETI- : UniRef90_A0B954
UniRef90_I0A2V5 : -NLNEEKIKNAIVMLTKVVNDVSVPRNIRRVATDAINKLKDPSLSPGVRAANAIQVLDEISQDPNMPVHTRITIWNIVSLLETV- : UniRef90_I0A2V5
UniRef90_Q6L2L8 : --MDEKLFQEVIALMEDLADDTSVPRNVRRAASDSKDRLLNGKESLDLKCATAISVLDDISNDPNVPAHGRAAIYTIISKLESLS : UniRef90_Q6L2L8
UniRef90_A8AAJ0 : ---NEAKIRQAKTMLMRVINDPAVPRNIRRACIEAVRHLENERLSPGVRAANAISALDEIVQDPNMPIHTRITIWNVVTLLETVK : UniRef90_A8AAJ0
UniRef90_H8I459 : ----EAVIKQCVDVLTRIKDDDTVPRNIRRSADNVKNILLDTKESPAVRAASSISILDEISNDPNIPLHTRTLIWNIASQLETIS : UniRef90_H8I459
UniRef90_L0A9C5 : ----EEKLKMAINILTGIINDTAVPRNIRRAAANALTYLRDTKLSAGVKAANAISSLDEISQDPNMPFHARTRIWQVLSMLETIK : UniRef90_L0A9C5
UniRef90_H1Z3J2 : ---PEKIINNCVMMLQQIMDDSTIPRNIRKVADETKKVLTNETQTLGLRAATAISMIDEISNDPNMPVHARTRIWGLVSQLETV- : UniRef90_H1Z3J2
UniRef90_A2ST72 : LNMPEDMIKQCIMMLHAMSEDSTIPRNIRRVADETMKVLQDEKKTIGLRAASALSMIDEVSNDSNMPIHARTRIWELASTLEAI- : UniRef90_A2ST72
UniRef90_A3DM73 : ---NETKIRNAMYMLMSIINDTAVPRNIRRAATEALNHLRNPKLTPGVRAANAISVLDSISQDPNMPINTRTKIWQIIAILETV- : UniRef90_A3DM73
UniRef90_Q9Y9F0 : ---NEGKIKLAMSILVTIINDTGVPRNIRRAAANALTHLRDPRLSPAVRAANAISALEEVSQDPNMPFYARTRIWQVITILETV- : UniRef90_Q9Y9F0
UniRef90_A6UTG9 : -----DKLKNIAFMLDEILGDTTVPRNIRAAAQKAKDSILDENEEYIVRSAAAVQYLDDISDDPNMPLHTRTQIWSIVSELETIK : UniRef90_A6UTG9
UniRef90_J0SAH7 : --TPQETINVCIQMLQHISDDNTIPRNIRRVADQTKSLLTNEQKSIGLRAAEAISTIDEISNDPNMPVHARTRIWELVSQLESI- : UniRef90_J0SAH7
UniRef90_L0KWS6 : ----KDVINQCIQILEHIANDSSVPRNIRRSASDVLTTLKNEEDPLFMRTTASISILEDISNDPNIPLHTRTLIWNVASQLETI- : UniRef90_L0KWS6
UniRef90_O27458 : LNMSNETFNRVSEILRHIMEDNSVPRNIRRAAEESNEILNNPDEDSTVRASTVISILDEISNDPNIPIHARTLVWEILSELESI- : UniRef90_O27458
UniRef90_D7DU43 : ----EDKIKNITYMLKEIIEDTTVPRNIRAAADNAKEALNNEENEFIVRSATAIQYLDDISEDPNMPTHTRTQIWSIVSELETIK : UniRef90_D7DU43
UniRef90_S5ZDF7 : -------IKNAIELLKQIADDRGVPRNIRRVATESIEVLMNPEMTPGLKAATVISKLDEISMDPNTPLFARTKIWQIVSLLEQVK : UniRef90_S5ZDF7
UniRef90_F2KNJ6 : --MAKEVPDSVLEVLDRIIQDDTVPRNIRRVASEIKENLLHGEESLAVRAASAISILEEISSDPNIPMHVRTLIWNVSSQLERIS : UniRef90_F2KNJ6
UniRef90_K4ME67 : ----EQVIQECKQKLEYIANDNSVPRNIRRSANEVLETLSKGKEPLFLRTSSSISILEDISNDPNIPVHTRTLIWDVASQLETI- : UniRef90_K4ME67
UniRef90_T0NAL5 : --MDSKLFEEVLYLLDELAQDTTVPKNVRKTAQDSKTRLQNDKESLDIRCATAVSLLDDMANDPNVPSHGRAALYTVISRLEALA : UniRef90_T0NAL5
UniRef90_A4YIC2 : ---NEAKIKQAIVLLQKVVNDTSVPRNIRRAASDAIRNLQDPSLSPAVRAANATAILDEISQDPNMPSQTRISIWNVVSILETI- : UniRef90_A4YIC2
UniRef90_D5VR89 : ---SEEILKAVVMMLDEIINDTTVPRNIRGAAEKAKEIILNEAEEPIVRSAKAIDVLNEIENDPNMPPYTRTQIWNIVSELERVK : UniRef90_D5VR89
UniRef90_Q2FQY4 : --TPEQTIDICIQMLSAIIDDGTIPRNIRRVADETRTILQNQDRQLGLRAAEAISKIDEISSDPNMPGHARTRVWELVSQLETV- : UniRef90_Q2FQY4
UniRef90_E1QPM7 : -----ERIKQALYYLTRVVQDMGIPRNIRRAASEAVRVLMDPNMSPGLKASTVISILDEALADPNMPLFSRVIFWQVISLLEQIK : UniRef90_E1QPM7
UniRef90_Q8TUH5 : -----EVIRQCLQVLDSITSDSSVPRNIRRSVNEIMDILNNESEPLFLRAASSISILEDISNDPNLPLHTRTLIWNLSSQLETI- : UniRef90_Q8TUH5
UniRef90_M9SEW9 : -----DKIKQIADAMDMLAEDTSVPRNIRKGATDAKARLLDTKDAMDVRCAGAINILDDLANDPNIPLQARTLIWQIISQLETVA : UniRef90_M9SEW9
UniRef90_F6D6H6 : --MNQDAFDRCNQILQHITEDTSVPRNIRRAAEESKNILAK-DEEATIRASSVISILDEISNDPNIPIHARTLIWNVLSELESV- : UniRef90_F6D6H6
UniRef90_A0RY22 : ---NRGTLKEAISVLNQITTNPSTPKTIRKNITDLVADLGSEEYRLAVRAANAISALDDITQDPNMPSFIRVSLWQAVSKLEGI- : UniRef90_A0RY22
UniRef90_X1AIJ9 : -----DKIMQVCDGLDMLHEDNSIPRNIRRGAEEVKNSLLNESDPLDVRVASAASRLDELANDPNIPLHGRTLIWNIMSRLEEIA : UniRef90_X1AIJ9
UniRef90_W8SHU5 : ----EERIEEAMNVLGLVSEDTTTPRNIRRAAKQSITALQISENTPAVRAANAISILDEILQDPNMPPYTRVKLWNVMSLLEAIK : UniRef90_W8SHU5
UniRef90_T0YE53 : --MDTKQYDEIIYLLDELAQDNTIPRNVRKHATDAKMRLSNKNESLDLRCAKVMSSLDDLTNDPNVPAHARTFLYTLMSKLESFS : UniRef90_T0YE53
UniRef90_T0LY33 : --MDSNLFNEVMYLLEEMSLDTSVPKNVRKNASDAKTKLENQKTSLDIRCATAISMLDEISNDPNVPSHGRASLYTIISKLEALA : UniRef90_T0LY33
UniRef90_Q8TV15 : ----EEKFEQCCTLLEQIIQDDQIPRNVRRAAKQAIEALKEEGQSPGVRASTAISTLEEVVNDQNTPEYARTVLLQVIATLEQVK : UniRef90_Q8TV15
UniRef90_S0ASK3 : --MDENLFNEVLALMDDLEDDSSIPRNVRKTSSEAKEKMKDGKESLDLRCANVISELDDISNDPNVPSHGRAAIYTIISKLEALS : UniRef90_S0ASK3
UniRef90_D3E1I0 : --MTNETFEEVSQILKHIMENPSVPRNIRRAADESFNTLNNEEEDETVRASAVIIKLDEISNDPNIPVHARTLIWEILSKLEAI- : UniRef90_D3E1I0
UniRef90_UPI00035C1A47 : ----EERRARIAQILETVVNDNTTPRNVRKAVKEAMDELFNERYSPSVRAANAIEKIEEVLSDGNIPSFTRTQLWLAISLLESIK : UniRef90_UPI00035C1A47
UniRef90_D2REP3 : --MAEDVLKAVLDTLDRIIQDDSVPRNVRKVANEIKSDLLNEKENIAVKAATAISTLEDLSSDPNLPMHVRTLIWNLSSLLEKL- : UniRef90_D2REP3
UniRef90_F0LJ65 : ----EERINQIIQVLEQVVQDTIVPRNIRRAAEEAIEHLMDRSKEPAVRAADAIAILEEISEDPNMPLHTRTIIWEVLGALEQI- : UniRef90_F0LJ65
UniRef90_L0HIV0 : -----KTMENCILMLQHIQEDSSIPRNIRRVADETRAMLLNNNKAMGLRAAEAISKIDEISNDPNMPIHARTRIWELVSQLETI- : UniRef90_L0HIV0
UniRef90_R9SLM2 : --MVNEIFQEVSEILNYIMENNTVPRNIRKAAEESNDILMNGEDDDTVRASSVIVILDDISNDPNIPVHARTLIWEILSKLESL- : UniRef90_R9SLM2
UniRef90_X1HLT4 : -----ETFKNVEFLLNGMINDRGVPRNIKRVAQKGIDELQRDDDTPAVLASNVMYMINDLAQDANIPFHSRTTIYRIISLLENIK : UniRef90_X1HLT4
UniRef90_T0LH18 : --MDNKLYSELIYLLEELSQDTSVPKNVRKSSIDARNKLSDAKVTLDLRCATAISMLDEIANDPNVPSHGRAALYTIISKLEALS : UniRef90_T0LH18
UniRef90_F3KL27 : -KQNKETMKEAIETLNQIATNHSTPKTIKKAITDLITDLNNEEYSLSVRANNTISLLDDVTQDPNMPSYVRTQLWQAVSKLESI- : UniRef90_F3KL27
UniRef90_X1EHB8 : --VVKNAFEEVENLLNGLLGDRSVPRNIKRIAQKGIDELHKEDETAGVLASNVMYMVDDLSLDPNIPFHSRTTIYRIISILEKIK : UniRef90_X1EHB8
UniRef90_X1N2I7 : --------NQAMAVLNRVADDNTTPRNIRRTAKQAGDMLLDESLSFAAKAANAIDLLEQISQDPNMPMYTRTRIWNVISVLEGI- : UniRef90_X1N2I7
UniRef90_T0ZXC3 : -------LTRLVATLAELADDVSVPRNVRRGAQAAKEELTKGRVALDVRIASAVAVLDDLANDPNVPTHGRTAIWSILSALESL- : UniRef90_T0ZXC3
UniRef90_Q2NE01 : ---NEEIFSNCTEILSQIINDTSVPRNIRKAAEDS-TNLLAKDEEPTIKASTVISILDDISNDPNIPIHARILIWNILSELEAVK : UniRef90_Q2NE01
UniRef90_T1BCF4 : -----AALERALEALSQLADDPSVPRNIRRGAQTAHDRVARSRAELDVRIAGAVSALDELANAPNLPSHGRTALWSILSSLESL- : UniRef90_T1BCF4
UniRef90_A8MDA8 : -NEANEKIAQALYYLERIIHDMGIPRNIRRAASEAARILRNNEMSPGLRASTVVSLLDDALSDPNMPTYSRVLILQIIAVLEQVK : UniRef90_A8MDA8
UniRef90_E6N3N7 : ----ESKRQQVVQILETIINDADTPRNIRRIAKQASTELFNEKLRPAVRAANSIELIEEIINDPNMPSFTRTQLWMAISILETI- : UniRef90_E6N3N7
UniRef90_L0HLT5 : -----KLYQEIVGMLEELSEDTSLPRNIRKGISNAKDILTKNGQALDVRIASAIFALDEIANDPNIPVHGRTMVYMIMGKLETLS : UniRef90_L0HLT5
UniRef90_T1D4Z8 : ---PNVVVGRVLESLTQLADDASLPRSARRAAQSAKDVLAKPGTPEDVRIASAVGVLDDLANNPNLPTHGRTAIWSIMSNLESV- : UniRef90_T1D4Z8
UniRef90_T0ZW22 : -----EMIAQIKQQIDSLLNDNSVPRNVKNSLGEAKAALEQESNPYSVRAGTATYKVDEISNDINLPPYARTVVWNILSMLEGIK : UniRef90_T0ZW22
UniRef90_P58016 : --MAKKGLEEVLETLDRIIHDETVPRNVRRVASEIKEKLTTTDE-VSLEAASAISVLEDISADPNLPMHVRTMIWNLTSQLERIS : UniRef90_P58016
UniRef90_A5UMP5 : --MSNQTIDEVSEILEYIMENNTVPRNIREAAQESNNLLKDESQDQSVKVSTVLTKLDEISNDPNIPVHARTLIWEVLSKLESI- : UniRef90_A5UMP5
UniRef90_D3RYL8 : ----NEALKNALDILNKIIHDDSVPRNVRRVASEIKEELSS-GENIAVKAATAISTLEELSADPNLPMHVRTMIWNLTSQLERLA : UniRef90_D3RYL8
UniRef90_E3GZJ2 : ----KETIQHVNEILDNIVNDTSIPRNIRRAAEESKEILNNEEEELSVRTSSVISILDEISNDPNIPVHARTLIWEVLSELEALK : UniRef90_E3GZJ2
UniRef90_X1C4J1 : ------KMEQARNILRTIADDQAVPKNIRRAAKKAVSELETGKITAAVSASIAISGLDDASQDPNCPLHARTKIWQAVSVLETI- : UniRef90_X1C4J1
UniRef90_UPI000368BB7F : MSTNEAKIKMAYDLLNNLVKDTGIPRNVREVCKEVANVLMSKDQSYGVKAATSISKIEEIIQDPTIPSYARTTLWRIISILEQI- : UniRef90_UPI000368BB7F
UniRef90_G7WL60 : ------------------MSDDTVPRNIRRSADSVKATLLNVQESEAIRAASAISILDEISNDPNIPLHTRTLIWNVASQLETV- : UniRef90_G7WL60
UniRef90_V6ARL5 : --QNQKSFDMAVQTLTQVAANPTTPKNIKKSLTDLIGSLKSSDDPMSVRAANAISQLDDITQDPNMPSYVRVTLWQAVSNLENI- : UniRef90_V6ARL5
UniRef90_Q647Q3 : ----EEIVKKCTEMLENMSRDVTVPRNIRKRMNKLQDNLLNGDEPLAERATSAIYELEELADNQNVTSHTRTLVWNLMSQLETVS : UniRef90_Q647Q3
UniRef90_UPI00036F6F81 : --QNLEFLNNSVSTLDQIATNPSTPKNIRKNIADIVEQLKSDEYSISVRAANTISLLDDVTQDPNLPSYVRTSLWQAVSTLESI- : UniRef90_UPI00036F6F81
UniRef90_UPI00037B9930 : MSTNEEKIRQAIEILNNLLKDIGVARQVKEACKDAISYLNDKKTSYGIRAANSISRIEEVTQDPTVPPYIRTTLWKVISILEQVK : UniRef90_UPI00037B9930
UniRef90_C7DGN2 : ------IVKQINFQMDSLISDTSVPKNVRSAVTEAKAKL-NEDGDYTVRISSAIYNLDSVSNDINLPPQARTVIWNILSMLESIK : UniRef90_C7DGN2
UniRef90_T0MXQ7 : -----------TKMLDDLISDYSVPRNIRKNIQAAKLKLSQNKGSLDVRAATSISTLDEIVNDPNTPGHARTLIYTIMGKLEIL- : UniRef90_T0MXQ7
UniRef90_K0IMZ6 : -KENQERLARAIETLDSITKNSDIQKSIRNMIKEVLLALKDEKGSVSVRAANAISLLDNATQSPQMQSHIRTMLWQVVSTLESI- : UniRef90_K0IMZ6
UniRef90_T0Z4H0 : -----ELIAQVNKQMDIITGDTSVPKNVRNAISEAKQKLNAAGD-ITVRISSAIYSVDGVSNDINLPPQARTMVWNLLSMLESIK : UniRef90_T0Z4H0
UniRef90_UPI00035F1392 : ---------EIFSVFSQLDEDQTVPKNVKLKLKDAITLLQEEDKDMAFRINKALEGLDELCEDSNIPNYTKTQLWNLVSLLESLK : UniRef90_UPI00035F1392
UniRef90_G0QFR0 : -------LEEVTKQMRDLAEQGSVPSNVSEKIEEAADELESEDRELSVRVNTASSILDEVSNDPNIRQHTRTEIWNLASKTESL- : UniRef90_G0QFR0
UniRef90_X1GH40 : ------------------------PRNIKRVAQKGIDELQREDDSPAVLASNVMYMITDLSQDANIPFHSRTTIYRIISLLENIK : UniRef90_X1GH40
UniRef90_G3C9D6 : ---NLENIRQAVAILQTLANDNVIPRNVRRSIKSVIDTLNDGSLTPAVRAANAIAALEEIAQDPNVPSYARVTLWNAFSYLERI- : UniRef90_G3C9D6
UniRef90_B1L6U9 : ----------------------SVPRNIRRATTEAIEVLRDERNSYGVRSNKAISILNDIVNDINMPFPTRSEILLIVGLLEKIK : UniRef90_B1L6U9
UniRef90_G0QBQ5 : ----------VKTRIERLTDDPEIPDDVSHKMREAVDELGGEGE-LSVRANSAASILQEIGNDPNISQHMRTEVWNLASKVENL- : UniRef90_G0QBQ5
UniRef90_M1PX30 : -------------------------------MNEIMDILNNESEPLFLRAASSISILEDISNDPNLPLHTRTLIWNLSSQLETI- : UniRef90_M1PX30
UniRef90_T0YX87 : -----QALDRVIEGLGQLTDDASLPRNIRRGAQGALDELNRIGPAMDLKVAGTVGLLDELASDVN-------------------- : UniRef90_T0YX87
UniRef90_H0A9E7 : -------VEEVASMMRDMAEKDSIPSNVSDMLEDAAEELEEEDKDLSVRVNTASSLLDQVSNDPNIRQHTRTEVWNLASKVESL- : UniRef90_H0A9E7
UniRef90_UPI00035A20DC : ----EEAVKESVSTMEQISQDTAV-------AEETKAVVQKEEEQASVKAVETQAIADDAQRDLN-------------------- : UniRef90_UPI00035A20DC
: 1---------11--------21--------31--------41--------51--------61--------71--------81--- :
OrigSeq : VRVDQNLFNEVMYLLDELSQDITVPKNVRKVAQDSKAKLSQENESLDLRCATVLSMLDEMANDPNVPAHGRTDLYTIISKLEALS : OrigSeq
Jnet : ---HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH-------HHHHHHHHHHHHHH--- : Jnet
jhmm : --HHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH-------HHHHHHHHHHHHHH--- : jhmm
jpssm : ---HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH-- : jpssm
Lupas 14 : -----------------------------------cccccccccccccc------------------------------------ : Lupas 14
Lupas 21 : ----------------------------ccccccccccccccccccccc------------------------------------ : Lupas 21
Lupas 28 : -----------------------------------cccccccccccccccccccccccccccc---------------------- : Lupas 28
Jnet_25 : ------BB--BB-BB--BB----BB--B--BB--BB--B------BBBBBB-BB-BB--BB----B--BBBBBBB-BBB-B---- : Jnet_25
Jnet_5 : -------B--B---B--B---------B---B--B---B--------B-BB-B---B--B---------B-B-B--B-------- : Jnet_5
Jnet_0 : ----------B----------------B------B--------------B-----------------------B----------- : Jnet_0
Jnet Rel : 9923899999999999751788773789999999999862478877557889999999875278875179999999999987389 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.