SILENT_MODE BLOCK_FILE jp_ZDcznOv.concise.blc MAX_NSEQ 281 MAX_INPUT_LEN 283 OUTPUT_FILE jp_ZDcznOv.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 119 270 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 271 119 280 H SPACE SUB_CHARS 1 271 119 280 E SPACE SUB_CHARS 1 271 119 280 - SPACE STRAND 63 274 67 COLOUR_TEXT_REGION 63 274 67 274 51 STRAND 74 274 80 COLOUR_TEXT_REGION 74 274 80 274 51 STRAND 115 274 115 COLOUR_TEXT_REGION 115 274 115 274 51 HELIX 4 274 36 COLOUR_TEXT_REGION 4 274 36 274 50 HELIX 40 274 59 COLOUR_TEXT_REGION 40 274 59 274 50 HELIX 62 274 62 COLOUR_TEXT_REGION 62 274 62 274 50 HELIX 81 274 95 COLOUR_TEXT_REGION 81 274 95 274 50 HELIX 100 274 111 COLOUR_TEXT_REGION 100 274 111 274 50 HELIX 114 274 114 COLOUR_TEXT_REGION 114 274 114 274 50 STRAND 63 279 67 COLOUR_TEXT_REGION 63 279 67 279 51 STRAND 74 279 80 COLOUR_TEXT_REGION 74 279 80 279 51 HELIX 3 279 36 COLOUR_TEXT_REGION 3 279 36 279 50 HELIX 40 279 59 COLOUR_TEXT_REGION 40 279 59 279 50 HELIX 62 279 62 COLOUR_TEXT_REGION 62 279 62 279 50 HELIX 81 279 95 COLOUR_TEXT_REGION 81 279 95 279 50 HELIX 100 279 108 COLOUR_TEXT_REGION 100 279 108 279 50 HELIX 114 279 115 COLOUR_TEXT_REGION 114 279 115 279 50 STRAND 64 280 66 COLOUR_TEXT_REGION 64 280 66 280 51 STRAND 74 280 79 COLOUR_TEXT_REGION 74 280 79 280 51 STRAND 115 280 116 COLOUR_TEXT_REGION 115 280 116 280 51 HELIX 4 280 36 COLOUR_TEXT_REGION 4 280 36 280 50 HELIX 40 280 60 COLOUR_TEXT_REGION 40 280 60 280 50 HELIX 62 280 63 COLOUR_TEXT_REGION 62 280 63 280 50 HELIX 80 280 96 COLOUR_TEXT_REGION 80 280 96 280 50 HELIX 100 280 114 COLOUR_TEXT_REGION 100 280 114 280 50