SILENT_MODE
BLOCK_FILE jp_9f2dl1U.concise.blc
MAX_NSEQ 663
MAX_INPUT_LEN 665
OUTPUT_FILE jp_9f2dl1U.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 101 652   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 653 101 662 H SPACE
SUB_CHARS 1 653 101 662 E SPACE
SUB_CHARS 1 653 101 662 - SPACE
STRAND 2 656 6
COLOUR_TEXT_REGION 2 656 6 656 51
STRAND 30 656 35
COLOUR_TEXT_REGION 30 656 35 656 51
STRAND 55 656 62
COLOUR_TEXT_REGION 55 656 62 656 51
STRAND 73 656 77
COLOUR_TEXT_REGION 73 656 77 656 51
HELIX 12 656 26
COLOUR_TEXT_REGION 12 656 26 656 50
HELIX 47 656 51
COLOUR_TEXT_REGION 47 656 51 656 50
HELIX 80 656 95
COLOUR_TEXT_REGION 80 656 95 656 50
STRAND 2 661 6
COLOUR_TEXT_REGION 2 661 6 661 51
STRAND 30 661 35
COLOUR_TEXT_REGION 30 661 35 661 51
STRAND 55 661 61
COLOUR_TEXT_REGION 55 661 61 661 51
STRAND 74 661 77
COLOUR_TEXT_REGION 74 661 77 661 51
HELIX 12 661 26
COLOUR_TEXT_REGION 12 661 26 661 50
HELIX 47 661 52
COLOUR_TEXT_REGION 47 661 52 661 50
HELIX 79 661 95
COLOUR_TEXT_REGION 79 661 95 661 50
STRAND 2 662 6
COLOUR_TEXT_REGION 2 662 6 662 51
STRAND 30 662 35
COLOUR_TEXT_REGION 30 662 35 662 51
STRAND 55 662 62
COLOUR_TEXT_REGION 55 662 62 662 51
STRAND 73 662 77
COLOUR_TEXT_REGION 73 662 77 662 51
HELIX 12 662 26
COLOUR_TEXT_REGION 12 662 26 662 50
HELIX 47 662 51
COLOUR_TEXT_REGION 47 662 51 662 50
HELIX 81 662 95
COLOUR_TEXT_REGION 81 662 95 662 50