SILENT_MODE BLOCK_FILE jp_4DKmiF_.concise.blc MAX_NSEQ 973 MAX_INPUT_LEN 975 OUTPUT_FILE jp_4DKmiF_.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 186 962 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 963 186 972 H SPACE SUB_CHARS 1 963 186 972 E SPACE SUB_CHARS 1 963 186 972 - SPACE STRAND 4 966 9 COLOUR_TEXT_REGION 4 966 9 966 51 STRAND 31 966 37 COLOUR_TEXT_REGION 31 966 37 966 51 STRAND 42 966 44 COLOUR_TEXT_REGION 42 966 44 966 51 STRAND 49 966 53 COLOUR_TEXT_REGION 49 966 53 966 51 STRAND 67 966 72 COLOUR_TEXT_REGION 67 966 72 966 51 STRAND 101 966 103 COLOUR_TEXT_REGION 101 966 103 966 51 STRAND 139 966 140 COLOUR_TEXT_REGION 139 966 140 966 51 STRAND 146 966 146 COLOUR_TEXT_REGION 146 966 146 966 51 STRAND 151 966 154 COLOUR_TEXT_REGION 151 966 154 966 51 HELIX 15 966 26 COLOUR_TEXT_REGION 15 966 26 966 50 HELIX 84 966 95 COLOUR_TEXT_REGION 84 966 95 966 50 HELIX 109 966 111 COLOUR_TEXT_REGION 109 966 111 966 50 HELIX 128 966 134 COLOUR_TEXT_REGION 128 966 134 966 50 HELIX 159 966 183 COLOUR_TEXT_REGION 159 966 183 966 50 STRAND 4 971 9 COLOUR_TEXT_REGION 4 971 9 971 51 STRAND 31 971 37 COLOUR_TEXT_REGION 31 971 37 971 51 STRAND 43 971 44 COLOUR_TEXT_REGION 43 971 44 971 51 STRAND 50 971 53 COLOUR_TEXT_REGION 50 971 53 971 51 STRAND 67 971 72 COLOUR_TEXT_REGION 67 971 72 971 51 STRAND 100 971 105 COLOUR_TEXT_REGION 100 971 105 971 51 STRAND 121 971 124 COLOUR_TEXT_REGION 121 971 124 971 51 STRAND 139 971 140 COLOUR_TEXT_REGION 139 971 140 971 51 STRAND 145 971 147 COLOUR_TEXT_REGION 145 971 147 971 51 STRAND 151 971 154 COLOUR_TEXT_REGION 151 971 154 971 51 HELIX 15 971 26 COLOUR_TEXT_REGION 15 971 26 971 50 HELIX 85 971 95 COLOUR_TEXT_REGION 85 971 95 971 50 HELIX 107 971 113 COLOUR_TEXT_REGION 107 971 113 971 50 HELIX 127 971 134 COLOUR_TEXT_REGION 127 971 134 971 50 HELIX 159 971 172 COLOUR_TEXT_REGION 159 971 172 971 50 HELIX 174 971 184 COLOUR_TEXT_REGION 174 971 184 971 50 STRAND 4 972 9 COLOUR_TEXT_REGION 4 972 9 972 51 STRAND 31 972 36 COLOUR_TEXT_REGION 31 972 36 972 51 STRAND 42 972 44 COLOUR_TEXT_REGION 42 972 44 972 51 STRAND 48 972 53 COLOUR_TEXT_REGION 48 972 53 972 51 STRAND 67 972 72 COLOUR_TEXT_REGION 67 972 72 972 51 STRAND 140 972 141 COLOUR_TEXT_REGION 140 972 141 972 51 STRAND 151 972 154 COLOUR_TEXT_REGION 151 972 154 972 51 HELIX 15 972 27 COLOUR_TEXT_REGION 15 972 27 972 50 HELIX 79 972 96 COLOUR_TEXT_REGION 79 972 96 972 50 HELIX 129 972 134 COLOUR_TEXT_REGION 129 972 134 972 50 HELIX 160 972 183 COLOUR_TEXT_REGION 160 972 183 972 50