JALVIEW_ANNOTATION # Created by concise2jalview using 'jp_4DKmiF_.concise' as input NO_GRAPH Lupas_21 Coiled-coil prediction windowed over 21 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH Lupas_14 Coiled-coil prediction windowed over 14 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH Lupas_28 Coiled-coil prediction windowed over 28 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH jnetpred Final secondary structure prediction by Jnet |||E|E|E|E|E|E||||||H|H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|E|E|E|||||E|E|E|||||E|E|E|E|E||||||||||||||E|E|E|E|E|E||||||||||||H|H|H|H|H|H|H|H|H|H|H|H||||||E|E|E||||||H|H|H|||||||||||||||||H|H|H|H|H|H|H|||||E|E||||||E|||||E|E|E|E|||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||| BAR_GRAPH JNETCONF Confidence of Jnet prediction 0 (low) -> 9 (high) 9|9|7|4|8|9|8|7|4|4|7|8|7|4|6|8|9|9|9|9|9|9|9|9|8|7|0|5|8|7|3|8|9|9|8|5|0|7|8|7|3|2|7|4|1|6|5|1|2|9|9|8|5|3|6|7|7|7|6|6|6|7|7|7|7|5|1|6|7|7|5|0|5|7|8|7|6|4|3|1|1|0|1|2|9|9|9|9|9|9|9|9|9|8|6|1|3|6|7|2|0|0|0|0|1|7|2|0|0|0|0|0|2|7|6|5|2|2|5|7|1|0|1|2|7|7|0|2|1|4|4|3|3|0|4|5|5|2|2|1|1|3|6|7|1|0|1|7|6|3|4|7|7|4|4|7|8|6|2|6|8|9|9|9|9|9|9|9|9|8|7|2|0|7|9|9|9|9|9|9|8|7|5|1|8|9 NO_GRAPH JNETSOL25 Jnet solvent relative accessibility prediction at 25% cut-off -|-|-|B|B|B|B|B|B|B|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|B|-|B|-|B|B|B|B|B|B|-|-|-|-|-|B|-|B|-|-|-|B|-|B|B|B|-|B|-|B|-|-|B|-|-|-|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|B|-|-|B|-|-|B|B|-|B|B|-|B|B|B|-|-|B|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|B|B|B|B|B|B|B|B|B|B|-|B|B|-|-|B|-|-|-|-|B|-|-|-|-|B|B|-|B|-|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|B|B|-|-|-|B|B|-|-|B|B|-|-|B|B|- NO_GRAPH JNETSOL5 Jnet solvent relative accessibility prediction at 5% cut-off -|-|-|-|B|B|B|B|B|B|-|-|B|-|-|B|B|B|B|B|B|B|-|B|B|-|-|-|-|-|-|B|-|B|B|B|-|-|-|-|-|-|-|-|B|-|-|-|B|-|B|-|B|-|-|-|B|-|-|B|-|-|-|-|-|-|B|B|B|B|B|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|B|B|-|-|-|-|-|-|-|-|-|B|B|B|B|B|-|B|B|-|B|B|-|-|-|-|-|-|-|-|-|-|B|B|B|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|B|B|-|-|-|-|B|B|-|-|B|B|B|-|B|B|-|-|-|-|-|-|-|-|B|-|-|B|-|-|-|-|-|- NO_GRAPH JNETSOL0 Jnet solvent relative accessibility prediction at 0% cut-off -|-|-|-|B|B|B|B|B|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|B|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|B|-|-|-|-|-|B|-|-|B|B|-|-|B|B|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|- NO_GRAPH JNETHMM Jnet prediction using HMMer profiles |||E|E|E|E|E|E||||||H|H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|E|E|E||||||E|E||||||E|E|E|E||||||||||||||E|E|E|E|E|E|||||||||||||H|H|H|H|H|H|H|H|H|H|H|||||E|E|E|E|E|E||H|H|H|H|H|H|H||||||||E|E|E|E|||H|H|H|H|H|H|H|H|||||E|E|||||E|E|E||||E|E|E|E|||||H|H|H|H|H|H|H|H|H|H|H|H|H|H||H|H|H|H|H|H|H|H|H|H|H|| NO_GRAPH JNETPSSM Jnet prediction using PSSM profiles |||E|E|E|E|E|E||||||H|H|H|H|H|H|H|H|H|H|H|H|H||||E|E|E|E|E|E||||||E|E|E||||E|E|E|E|E|E||||||||||||||E|E|E|E|E|E|||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||||||||||||||||||||||||||||H|H|H|H|H|H||||||E|E||||||||||E|E|E|E||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||| NO_GRAPH JNETJURY Positions where Jnet predictions do not agree | | | | | | | | | | | | | | | | | | | | | | | | | |*| | | | | | | | | |*| | | | |*| | | | | |*|*| | | | | | | | | | | | | | | | | | | | | | | | | | | | | |*|*|*|*|*|*| | | | | | | | | | | |*| | | |*|*|*|*|*|*| |*|*|*|*|*|*|*| | | | | | | |*|*|*|*| | |*|*| | | | | | | | | | |*| |*| | | |*|*|*| | | | | | | | | | | |*| | | | | | | | | | | | | |*| | | | | | | | | | |*| |