QUERY                  : SYFEPTGPYLMVNVTGVDSKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVVIEKK : QUERY 
UniRef90_E7PXP3        : EYREPAGPHLMINMMGVNNKGDYILTPPFMEINLKPGEVVDKEAILKYIQWSIYAVTVDKYRIVKIPEDAQIQVTYYDKAEKDYVTKSYPITESGFVVPDLSEYKKNPSFNLVADIEIEK- : UniRef90_E7PXP3
UniRef90_UPI00034AA20F : DYQEIAGPHLIVRITAHDKQGKNSFEPRYVEFPLKPGKVLTKKDVINYIEWTLDAHDYNKYRVVELDSEAKIQVSYFSKTEKQVVTEYFPVTEKGFIIPDLSEHVHNPGFVIVTDVVVEER : UniRef90_UPI00034AA20F
UniRef90_A0A034GYG2    : DYQETPGHHLMVNVTARDTNGNVVSLPHYSEFRLTPNTVLTKDMVKEFIEWNLDGADYKRFKVMDIPSDAKIQVVYDNIDTKERETKIFPITDKGFVIPDLSKHVKNPSFTLVTDVTVVEK : UniRef90_A0A034GYG2
UniRef90_UPI00031C37C1 : DYQEIQGTHLMVNVTGVDKKGNEILVPGFIEFPLTPGEVLTKKDILNYVQIAIDAKAADEYRVVNLAPNSKIEVSYSN-----NKSDIFPITDKGFVIPDLTKHIENPSFKLITNVVLEEK : UniRef90_UPI00031C37C1
UniRef90_Z1YCS5        : SYFEPTGPYLMVNVTGVDGKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSAKIEVTYYDKNKKKRRNEVFPYNRKRFCCP---------------------- : UniRef90_Z1YCS5
UniRef90_Q934F7        : NYQEPQGTMLTINITGESKEGQLLLSPEYMQFRLTAGEVINKNELLDKVQLVIDSAASNQFEVVDFKPESKVEWSYFDRHELL------DITERGFIVPDYSIYEKKPSFLLTGPVIIQRK : UniRef90_Q934F7
UniRef90_Q4ZCZ1        : DYHEIQGVHLMMNVTGVDENGKIVYLPQYLEFPLTEGDVLNYKFISEKVQQTLDASGHGKFQFVGFLEGTKIEWNY------KNEQKFYDITDSGFKVPDYTKYEKTPNYKLIGKVIVKE- : UniRef90_Q4ZCZ1
UniRef90_UPI0004709EA3 : DFQEPEGTHLIINLTGIDSAGNDLVYPNFLEIPLQVGQQLTKRQLIQFTQTMIDHTEPNRYKVIDFAEDT--QITFSLTNHKL----SYPISETGFQVPDLTKLSNNPALLLKGKVILQ-- : UniRef90_UPI0004709EA3
UniRef90_R4ZY65        : -YVENPNPHIIVNVTGTDQNGNSIL-PHYIEVNVNMGQTLSKKEILDYIARNLNSSVGGESKNVQYSNIEFKESAYLKRQLDDGKTEEIAIDNDGVTVP---------------------- : UniRef90_R4ZY65
UniRef90_C0M9F5        : DYQETTGLYLMVNITGVDNTNHTIVSPHYQDIRLEYGKTYTTNEMIKLVQDVIDPSA-ESFKVISL------------KNAKLTKASTAEISTDHFTTPIKGQHQKDQTYILTGQVLVEK- : UniRef90_C0M9F5
UniRef90_G5KI29        : NYQEMKGPKLIVRLVGINDNPADRIESHYMQYAIEQGQVISKSKLLYYAQEMLHNTVGGNIQVVAFEEGAKRQVSPLN----GGIMHEMPITEYGVDIPYTKDSDDNPTYVLKGNIYFKR- : UniRef90_G5KI29
UniRef90_Q9ZFE2        : DYQDTTGLYLMINVNGVDSRHNTLVLPQYQDIKLDYNKTYTKDELLRFVQNVIDASM-ENFKVIDLHEVKLVRTA---TQEEMSPNTFSTLAENQY-------NDANQSYLLTGNVLVE-- : UniRef90_Q9ZFE2
UniRef90_G0P485        : -------------------------STHYIDFRTKRMGALQTGEQLYFVQNMAFELLIKEFNFYKFQPEMKIEWEYYEKGEKLKELEAFEIEKFKEKIPFTSNGKKKPILTVTAPRVVEEK : UniRef90_G0P485

                       : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111------- :
OrigSeq                : SYFEPTGPYLMVNVTGVDSKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVVIEKK : OrigSeq

Jnet                   : --------EEEEEEEEEE----EEEE---EEEE-----E--HHHHHHHHHHHH-------EEEEEE----EEEEEE----------EEEEE----EEEE----------EEEEEEEEEE-- : Jnet
jhmm                   : --------EEEEEEEEEE----EEEE---EEE------EE-HHHHHHHHHHHH-------EEEEEE----EEEEEE----------EEEEE----EEEEEEE-------EEEEEEEEEEE- : jhmm
jpssm                  : --------EEEEEEEEE-----EEEE---EEEEE-------HHHHHHHHHHHH-------EEEEEE----EEEEEE----------EEEEE----EE-------------EEEEEEEEE-- : jpssm

Lupas 14               : ------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21               : ------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28               : ------------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25                : -------BBBBBBBBBBB-----BBBB-BB-B-B-----B-B--BB-BB--BBB---B--B-BB-B-------BBBB----------BB-B----B-BBBB------BBBBB-B-B-B--- : Jnet_25
Jnet_5                 : ---------BBB-B-B----------------------------B---B---B-------B-B----------------------------------B-------------B--------- : Jnet_5
Jnet_0                 : ---------B-B-B----------------------------------B------------------------------------------------------------------------ : Jnet_0
Jnet Rel               : 9988887458888999608873687157558823213212468999999997516888752788716885589874344535777517861577344310235456777158899998439 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.