SILENT_MODE BLOCK_FILE jp_yY0WRtI.concise.blc MAX_NSEQ 1051 MAX_INPUT_LEN 1053 OUTPUT_FILE jp_yY0WRtI.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 176 1040 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1041 176 1050 H SPACE SUB_CHARS 1 1041 176 1050 E SPACE SUB_CHARS 1 1041 176 1050 - SPACE STRAND 24 1044 28 COLOUR_TEXT_REGION 24 1044 28 1044 51 STRAND 49 1044 53 COLOUR_TEXT_REGION 49 1044 53 1044 51 STRAND 60 1044 66 COLOUR_TEXT_REGION 60 1044 66 1044 51 STRAND 73 1044 78 COLOUR_TEXT_REGION 73 1044 78 1044 51 STRAND 86 1044 88 COLOUR_TEXT_REGION 86 1044 88 1044 51 STRAND 126 1044 129 COLOUR_TEXT_REGION 126 1044 129 1044 51 HELIX 5 1044 18 COLOUR_TEXT_REGION 5 1044 18 1044 50 HELIX 95 1044 102 COLOUR_TEXT_REGION 95 1044 102 1044 50 HELIX 110 1044 121 COLOUR_TEXT_REGION 110 1044 121 1044 50 HELIX 140 1044 151 COLOUR_TEXT_REGION 140 1044 151 1044 50 HELIX 164 1044 173 COLOUR_TEXT_REGION 164 1044 173 1044 50 STRAND 24 1049 28 COLOUR_TEXT_REGION 24 1049 28 1049 51 STRAND 50 1049 53 COLOUR_TEXT_REGION 50 1049 53 1049 51 STRAND 60 1049 66 COLOUR_TEXT_REGION 60 1049 66 1049 51 STRAND 73 1049 78 COLOUR_TEXT_REGION 73 1049 78 1049 51 STRAND 86 1049 89 COLOUR_TEXT_REGION 86 1049 89 1049 51 STRAND 126 1049 129 COLOUR_TEXT_REGION 126 1049 129 1049 51 HELIX 5 1049 18 COLOUR_TEXT_REGION 5 1049 18 1049 50 HELIX 95 1049 101 COLOUR_TEXT_REGION 95 1049 101 1049 50 HELIX 110 1049 121 COLOUR_TEXT_REGION 110 1049 121 1049 50 HELIX 143 1049 151 COLOUR_TEXT_REGION 143 1049 151 1049 50 HELIX 165 1049 173 COLOUR_TEXT_REGION 165 1049 173 1049 50 STRAND 23 1050 28 COLOUR_TEXT_REGION 23 1050 28 1050 51 STRAND 49 1050 52 COLOUR_TEXT_REGION 49 1050 52 1050 51 STRAND 60 1050 66 COLOUR_TEXT_REGION 60 1050 66 1050 51 STRAND 73 1050 78 COLOUR_TEXT_REGION 73 1050 78 1050 51 STRAND 126 1050 129 COLOUR_TEXT_REGION 126 1050 129 1050 51 HELIX 5 1050 18 COLOUR_TEXT_REGION 5 1050 18 1050 50 HELIX 85 1050 88 COLOUR_TEXT_REGION 85 1050 88 1050 50 HELIX 95 1050 102 COLOUR_TEXT_REGION 95 1050 102 1050 50 HELIX 111 1050 122 COLOUR_TEXT_REGION 111 1050 122 1050 50 HELIX 139 1050 151 COLOUR_TEXT_REGION 139 1050 151 1050 50 HELIX 163 1050 172 COLOUR_TEXT_REGION 163 1050 172 1050 50