SILENT_MODE
BLOCK_FILE jp_RbrK7W_.concise.blc
MAX_NSEQ 50
MAX_INPUT_LEN 50
OUTPUT_FILE jp_RbrK7W_.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 78 31   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 32 78 41 H SPACE
SUB_CHARS 1 32 78 41 E SPACE
SUB_CHARS 1 32 78 41 - SPACE
STRAND 6 35 10
COLOUR_TEXT_REGION 6 35 10 35 51
STRAND 33 35 38
COLOUR_TEXT_REGION 33 35 38 35 51
STRAND 44 35 48
COLOUR_TEXT_REGION 44 35 48 35 51
STRAND 67 35 69
COLOUR_TEXT_REGION 67 35 69 35 51
HELIX 24 35 25
COLOUR_TEXT_REGION 24 35 25 35 50
HELIX 54 35 61
COLOUR_TEXT_REGION 54 35 61 35 50
HELIX 66 35 66
COLOUR_TEXT_REGION 66 35 66 35 50
STRAND 6 40 10
COLOUR_TEXT_REGION 6 40 10 40 51
STRAND 35 40 37
COLOUR_TEXT_REGION 35 40 37 40 51
STRAND 44 40 47
COLOUR_TEXT_REGION 44 40 47 40 51
HELIX 22 40 29
COLOUR_TEXT_REGION 22 40 29 40 50
HELIX 32 40 34
COLOUR_TEXT_REGION 32 40 34 40 50
HELIX 54 40 63
COLOUR_TEXT_REGION 54 40 63 40 50
HELIX 66 40 69
COLOUR_TEXT_REGION 66 40 69 40 50
HELIX 73 40 75
COLOUR_TEXT_REGION 73 40 75 40 50
STRAND 6 41 10
COLOUR_TEXT_REGION 6 41 10 41 51
STRAND 25 41 25
COLOUR_TEXT_REGION 25 41 25 41 51
STRAND 33 41 38
COLOUR_TEXT_REGION 33 41 38 41 51
STRAND 43 41 48
COLOUR_TEXT_REGION 43 41 48 41 51
STRAND 66 41 69
COLOUR_TEXT_REGION 66 41 69 41 51
HELIX 54 41 60
COLOUR_TEXT_REGION 54 41 60 41 50