SILENT_MODE BLOCK_FILE jp_yd7yIQO.concise.blc MAX_NSEQ 556 MAX_INPUT_LEN 558 OUTPUT_FILE jp_yd7yIQO.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 203 545 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 546 203 555 H SPACE SUB_CHARS 1 546 203 555 E SPACE SUB_CHARS 1 546 203 555 - SPACE STRAND 54 549 57 COLOUR_TEXT_REGION 54 549 57 549 51 STRAND 82 549 91 COLOUR_TEXT_REGION 82 549 91 549 51 STRAND 97 549 106 COLOUR_TEXT_REGION 97 549 106 549 51 STRAND 148 549 155 COLOUR_TEXT_REGION 148 549 155 549 51 STRAND 178 549 185 COLOUR_TEXT_REGION 178 549 185 549 51 STRAND 189 549 198 COLOUR_TEXT_REGION 189 549 198 549 51 HELIX 14 549 35 COLOUR_TEXT_REGION 14 549 35 549 50 HELIX 44 549 49 COLOUR_TEXT_REGION 44 549 49 549 50 HELIX 60 549 78 COLOUR_TEXT_REGION 60 549 78 549 50 HELIX 119 549 139 COLOUR_TEXT_REGION 119 549 139 549 50 STRAND 54 554 57 COLOUR_TEXT_REGION 54 554 57 554 51 STRAND 82 554 91 COLOUR_TEXT_REGION 82 554 91 554 51 STRAND 97 554 106 COLOUR_TEXT_REGION 97 554 106 554 51 STRAND 148 554 155 COLOUR_TEXT_REGION 148 554 155 554 51 STRAND 178 554 185 COLOUR_TEXT_REGION 178 554 185 554 51 STRAND 189 554 198 COLOUR_TEXT_REGION 189 554 198 554 51 HELIX 14 554 35 COLOUR_TEXT_REGION 14 554 35 554 50 HELIX 44 554 49 COLOUR_TEXT_REGION 44 554 49 554 50 HELIX 60 554 78 COLOUR_TEXT_REGION 60 554 78 554 50 HELIX 119 554 138 COLOUR_TEXT_REGION 119 554 138 554 50 STRAND 46 555 48 COLOUR_TEXT_REGION 46 555 48 555 51 STRAND 54 555 57 COLOUR_TEXT_REGION 54 555 57 555 51 STRAND 82 555 91 COLOUR_TEXT_REGION 82 555 91 555 51 STRAND 97 555 105 COLOUR_TEXT_REGION 97 555 105 555 51 STRAND 148 555 155 COLOUR_TEXT_REGION 148 555 155 555 51 STRAND 178 555 184 COLOUR_TEXT_REGION 178 555 184 555 51 STRAND 189 555 198 COLOUR_TEXT_REGION 189 555 198 555 51 HELIX 15 555 34 COLOUR_TEXT_REGION 15 555 34 555 50 HELIX 60 555 78 COLOUR_TEXT_REGION 60 555 78 555 50 HELIX 119 555 139 COLOUR_TEXT_REGION 119 555 139 555 50