SILENT_MODE BLOCK_FILE jp_L8KGVdx.concise.blc MAX_NSEQ 977 MAX_INPUT_LEN 979 OUTPUT_FILE jp_L8KGVdx.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 206 966 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 967 206 976 H SPACE SUB_CHARS 1 967 206 976 E SPACE SUB_CHARS 1 967 206 976 - SPACE STRAND 2 970 7 COLOUR_TEXT_REGION 2 970 7 970 51 STRAND 13 970 18 COLOUR_TEXT_REGION 13 970 18 970 51 STRAND 29 970 31 COLOUR_TEXT_REGION 29 970 31 970 51 STRAND 36 970 40 COLOUR_TEXT_REGION 36 970 40 970 51 STRAND 48 970 51 COLOUR_TEXT_REGION 48 970 51 970 51 STRAND 66 970 67 COLOUR_TEXT_REGION 66 970 67 970 51 STRAND 87 970 90 COLOUR_TEXT_REGION 87 970 90 970 51 STRAND 101 970 103 COLOUR_TEXT_REGION 101 970 103 970 51 STRAND 113 970 114 COLOUR_TEXT_REGION 113 970 114 970 51 STRAND 181 970 183 COLOUR_TEXT_REGION 181 970 183 970 51 STRAND 192 970 192 COLOUR_TEXT_REGION 192 970 192 970 51 STRAND 199 970 203 COLOUR_TEXT_REGION 199 970 203 970 51 HELIX 169 970 174 COLOUR_TEXT_REGION 169 970 174 970 50 STRAND 2 975 7 COLOUR_TEXT_REGION 2 975 7 975 51 STRAND 13 975 18 COLOUR_TEXT_REGION 13 975 18 975 51 STRAND 29 975 31 COLOUR_TEXT_REGION 29 975 31 975 51 STRAND 36 975 41 COLOUR_TEXT_REGION 36 975 41 975 51 STRAND 48 975 52 COLOUR_TEXT_REGION 48 975 52 975 51 STRAND 65 975 68 COLOUR_TEXT_REGION 65 975 68 975 51 STRAND 86 975 91 COLOUR_TEXT_REGION 86 975 91 975 51 STRAND 100 975 104 COLOUR_TEXT_REGION 100 975 104 975 51 STRAND 112 975 115 COLOUR_TEXT_REGION 112 975 115 975 51 STRAND 181 975 183 COLOUR_TEXT_REGION 181 975 183 975 51 STRAND 199 975 203 COLOUR_TEXT_REGION 199 975 203 975 51 HELIX 168 975 175 COLOUR_TEXT_REGION 168 975 175 975 50 STRAND 2 976 7 COLOUR_TEXT_REGION 2 976 7 976 51 STRAND 13 976 18 COLOUR_TEXT_REGION 13 976 18 976 51 STRAND 29 976 31 COLOUR_TEXT_REGION 29 976 31 976 51 STRAND 37 976 38 COLOUR_TEXT_REGION 37 976 38 976 51 STRAND 181 976 184 COLOUR_TEXT_REGION 181 976 184 976 51 STRAND 191 976 192 COLOUR_TEXT_REGION 191 976 192 976 51 STRAND 199 976 203 COLOUR_TEXT_REGION 199 976 203 976 51