SILENT_MODE BLOCK_FILE jp_62W5_YH.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_62W5_YH.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 218 15 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 16 218 25 H SPACE SUB_CHARS 1 16 218 25 E SPACE SUB_CHARS 1 16 218 25 - SPACE STRAND 32 19 35 COLOUR_TEXT_REGION 32 19 35 19 51 STRAND 45 19 45 COLOUR_TEXT_REGION 45 19 45 19 51 STRAND 53 19 55 COLOUR_TEXT_REGION 53 19 55 19 51 STRAND 64 19 65 COLOUR_TEXT_REGION 64 19 65 19 51 STRAND 80 19 85 COLOUR_TEXT_REGION 80 19 85 19 51 STRAND 93 19 96 COLOUR_TEXT_REGION 93 19 96 19 51 STRAND 100 19 107 COLOUR_TEXT_REGION 100 19 107 19 51 STRAND 111 19 117 COLOUR_TEXT_REGION 111 19 117 19 51 STRAND 126 19 131 COLOUR_TEXT_REGION 126 19 131 19 51 STRAND 141 19 145 COLOUR_TEXT_REGION 141 19 145 19 51 STRAND 155 19 161 COLOUR_TEXT_REGION 155 19 161 19 51 STRAND 168 19 172 COLOUR_TEXT_REGION 168 19 172 19 51 STRAND 204 19 207 COLOUR_TEXT_REGION 204 19 207 19 51 HELIX 5 19 9 COLOUR_TEXT_REGION 5 19 9 19 50 HELIX 68 19 70 COLOUR_TEXT_REGION 68 19 70 19 50 HELIX 188 19 194 COLOUR_TEXT_REGION 188 19 194 19 50 STRAND 32 24 35 COLOUR_TEXT_REGION 32 24 35 24 51 STRAND 44 24 45 COLOUR_TEXT_REGION 44 24 45 24 51 STRAND 52 24 55 COLOUR_TEXT_REGION 52 24 55 24 51 STRAND 80 24 85 COLOUR_TEXT_REGION 80 24 85 24 51 STRAND 93 24 96 COLOUR_TEXT_REGION 93 24 96 24 51 STRAND 100 24 107 COLOUR_TEXT_REGION 100 24 107 24 51 STRAND 111 24 116 COLOUR_TEXT_REGION 111 24 116 24 51 STRAND 126 24 131 COLOUR_TEXT_REGION 126 24 131 24 51 STRAND 141 24 145 COLOUR_TEXT_REGION 141 24 145 24 51 STRAND 156 24 162 COLOUR_TEXT_REGION 156 24 162 24 51 STRAND 168 24 172 COLOUR_TEXT_REGION 168 24 172 24 51 STRAND 182 24 183 COLOUR_TEXT_REGION 182 24 183 24 51 STRAND 204 24 206 COLOUR_TEXT_REGION 204 24 206 24 51 HELIX 4 24 10 COLOUR_TEXT_REGION 4 24 10 24 50 HELIX 17 24 19 COLOUR_TEXT_REGION 17 24 19 24 50 HELIX 64 24 71 COLOUR_TEXT_REGION 64 24 71 24 50 HELIX 188 24 194 COLOUR_TEXT_REGION 188 24 194 24 50 STRAND 31 25 36 COLOUR_TEXT_REGION 31 25 36 25 51 STRAND 63 25 65 COLOUR_TEXT_REGION 63 25 65 25 51 STRAND 69 25 70 COLOUR_TEXT_REGION 69 25 70 25 51 STRAND 78 25 85 COLOUR_TEXT_REGION 78 25 85 25 51 STRAND 94 25 96 COLOUR_TEXT_REGION 94 25 96 25 51 STRAND 100 25 107 COLOUR_TEXT_REGION 100 25 107 25 51 STRAND 111 25 117 COLOUR_TEXT_REGION 111 25 117 25 51 STRAND 125 25 131 COLOUR_TEXT_REGION 125 25 131 25 51 STRAND 141 25 146 COLOUR_TEXT_REGION 141 25 146 25 51 STRAND 155 25 161 COLOUR_TEXT_REGION 155 25 161 25 51 STRAND 167 25 173 COLOUR_TEXT_REGION 167 25 173 25 51 STRAND 203 25 207 COLOUR_TEXT_REGION 203 25 207 25 51 HELIX 5 25 9 COLOUR_TEXT_REGION 5 25 9 25 50 HELIX 187 25 194 COLOUR_TEXT_REGION 187 25 194 25 50