SILENT_MODE BLOCK_FILE jp__OWJ5Ed.concise.blc MAX_NSEQ 782 MAX_INPUT_LEN 784 OUTPUT_FILE jp__OWJ5Ed.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 249 771 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 772 249 781 H SPACE SUB_CHARS 1 772 249 781 E SPACE SUB_CHARS 1 772 249 781 - SPACE STRAND 5 775 10 COLOUR_TEXT_REGION 5 775 10 775 51 STRAND 37 775 41 COLOUR_TEXT_REGION 37 775 41 775 51 STRAND 59 775 62 COLOUR_TEXT_REGION 59 775 62 775 51 STRAND 75 775 77 COLOUR_TEXT_REGION 75 775 77 775 51 STRAND 89 775 92 COLOUR_TEXT_REGION 89 775 92 775 51 STRAND 122 775 126 COLOUR_TEXT_REGION 122 775 126 775 51 STRAND 161 775 165 COLOUR_TEXT_REGION 161 775 165 775 51 STRAND 206 775 209 COLOUR_TEXT_REGION 206 775 209 775 51 STRAND 230 775 232 COLOUR_TEXT_REGION 230 775 232 775 51 HELIX 17 775 30 COLOUR_TEXT_REGION 17 775 30 775 50 HELIX 47 775 54 COLOUR_TEXT_REGION 47 775 54 775 50 HELIX 78 775 83 COLOUR_TEXT_REGION 78 775 83 775 50 HELIX 96 775 100 COLOUR_TEXT_REGION 96 775 100 775 50 HELIX 105 775 117 COLOUR_TEXT_REGION 105 775 117 775 50 HELIX 132 775 134 COLOUR_TEXT_REGION 132 775 134 775 50 HELIX 136 775 151 COLOUR_TEXT_REGION 136 775 151 775 50 HELIX 179 775 197 COLOUR_TEXT_REGION 179 775 197 775 50 HELIX 215 775 223 COLOUR_TEXT_REGION 215 775 223 775 50 HELIX 239 775 247 COLOUR_TEXT_REGION 239 775 247 775 50 STRAND 5 780 9 COLOUR_TEXT_REGION 5 780 9 780 51 STRAND 37 780 41 COLOUR_TEXT_REGION 37 780 41 780 51 STRAND 59 780 63 COLOUR_TEXT_REGION 59 780 63 780 51 STRAND 75 780 77 COLOUR_TEXT_REGION 75 780 77 780 51 STRAND 89 780 92 COLOUR_TEXT_REGION 89 780 92 780 51 STRAND 122 780 126 COLOUR_TEXT_REGION 122 780 126 780 51 STRAND 161 780 165 COLOUR_TEXT_REGION 161 780 165 780 51 STRAND 207 780 209 COLOUR_TEXT_REGION 207 780 209 780 51 STRAND 230 780 232 COLOUR_TEXT_REGION 230 780 232 780 51 HELIX 17 780 30 COLOUR_TEXT_REGION 17 780 30 780 50 HELIX 47 780 54 COLOUR_TEXT_REGION 47 780 54 780 50 HELIX 79 780 84 COLOUR_TEXT_REGION 79 780 84 780 50 HELIX 95 780 100 COLOUR_TEXT_REGION 95 780 100 780 50 HELIX 105 780 117 COLOUR_TEXT_REGION 105 780 117 780 50 HELIX 130 780 150 COLOUR_TEXT_REGION 130 780 150 780 50 HELIX 179 780 200 COLOUR_TEXT_REGION 179 780 200 780 50 HELIX 215 780 223 COLOUR_TEXT_REGION 215 780 223 780 50 HELIX 239 780 247 COLOUR_TEXT_REGION 239 780 247 780 50 STRAND 5 781 10 COLOUR_TEXT_REGION 5 781 10 781 51 STRAND 37 781 41 COLOUR_TEXT_REGION 37 781 41 781 51 STRAND 60 781 61 COLOUR_TEXT_REGION 60 781 61 781 51 STRAND 89 781 92 COLOUR_TEXT_REGION 89 781 92 781 51 STRAND 122 781 127 COLOUR_TEXT_REGION 122 781 127 781 51 STRAND 161 781 167 COLOUR_TEXT_REGION 161 781 167 781 51 STRAND 205 781 209 COLOUR_TEXT_REGION 205 781 209 781 51 STRAND 230 781 232 COLOUR_TEXT_REGION 230 781 232 781 51 HELIX 17 781 29 COLOUR_TEXT_REGION 17 781 29 781 50 HELIX 47 781 54 COLOUR_TEXT_REGION 47 781 54 781 50 HELIX 76 781 83 COLOUR_TEXT_REGION 76 781 83 781 50 HELIX 96 781 100 COLOUR_TEXT_REGION 96 781 100 781 50 HELIX 105 781 117 COLOUR_TEXT_REGION 105 781 117 781 50 HELIX 137 781 151 COLOUR_TEXT_REGION 137 781 151 781 50 HELIX 179 781 196 COLOUR_TEXT_REGION 179 781 196 781 50 HELIX 215 781 222 COLOUR_TEXT_REGION 215 781 222 781 50 HELIX 239 781 247 COLOUR_TEXT_REGION 239 781 247 781 50