SILENT_MODE BLOCK_FILE jp_okhwBVk.concise.blc MAX_NSEQ 428 MAX_INPUT_LEN 430 OUTPUT_FILE jp_okhwBVk.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 234 417 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 418 234 427 H SPACE SUB_CHARS 1 418 234 427 E SPACE SUB_CHARS 1 418 234 427 - SPACE STRAND 9 421 16 COLOUR_TEXT_REGION 9 421 16 421 51 STRAND 20 421 25 COLOUR_TEXT_REGION 20 421 25 421 51 STRAND 45 421 53 COLOUR_TEXT_REGION 45 421 53 421 51 STRAND 164 421 173 COLOUR_TEXT_REGION 164 421 173 421 51 STRAND 191 421 195 COLOUR_TEXT_REGION 191 421 195 421 51 STRAND 201 421 208 COLOUR_TEXT_REGION 201 421 208 421 51 STRAND 227 421 232 COLOUR_TEXT_REGION 227 421 232 421 51 HELIX 28 421 35 COLOUR_TEXT_REGION 28 421 35 421 50 HELIX 63 421 69 COLOUR_TEXT_REGION 63 421 69 421 50 HELIX 75 421 84 COLOUR_TEXT_REGION 75 421 84 421 50 HELIX 92 421 113 COLOUR_TEXT_REGION 92 421 113 421 50 HELIX 125 421 134 COLOUR_TEXT_REGION 125 421 134 421 50 HELIX 145 421 159 COLOUR_TEXT_REGION 145 421 159 421 50 HELIX 176 421 187 COLOUR_TEXT_REGION 176 421 187 421 50 HELIX 213 421 223 COLOUR_TEXT_REGION 213 421 223 421 50 STRAND 9 426 16 COLOUR_TEXT_REGION 9 426 16 426 51 STRAND 20 426 25 COLOUR_TEXT_REGION 20 426 25 426 51 STRAND 44 426 53 COLOUR_TEXT_REGION 44 426 53 426 51 STRAND 164 426 173 COLOUR_TEXT_REGION 164 426 173 426 51 STRAND 191 426 195 COLOUR_TEXT_REGION 191 426 195 426 51 STRAND 201 426 208 COLOUR_TEXT_REGION 201 426 208 426 51 STRAND 227 426 232 COLOUR_TEXT_REGION 227 426 232 426 51 HELIX 29 426 35 COLOUR_TEXT_REGION 29 426 35 426 50 HELIX 63 426 69 COLOUR_TEXT_REGION 63 426 69 426 50 HELIX 75 426 84 COLOUR_TEXT_REGION 75 426 84 426 50 HELIX 92 426 113 COLOUR_TEXT_REGION 92 426 113 426 50 HELIX 125 426 134 COLOUR_TEXT_REGION 125 426 134 426 50 HELIX 145 426 159 COLOUR_TEXT_REGION 145 426 159 426 50 HELIX 176 426 188 COLOUR_TEXT_REGION 176 426 188 426 50 HELIX 213 426 223 COLOUR_TEXT_REGION 213 426 223 426 50 STRAND 9 427 16 COLOUR_TEXT_REGION 9 427 16 427 51 STRAND 20 427 25 COLOUR_TEXT_REGION 20 427 25 427 51 STRAND 46 427 48 COLOUR_TEXT_REGION 46 427 48 427 51 STRAND 51 427 52 COLOUR_TEXT_REGION 51 427 52 427 51 STRAND 89 427 89 COLOUR_TEXT_REGION 89 427 89 427 51 STRAND 164 427 173 COLOUR_TEXT_REGION 164 427 173 427 51 STRAND 191 427 195 COLOUR_TEXT_REGION 191 427 195 427 51 STRAND 201 427 208 COLOUR_TEXT_REGION 201 427 208 427 51 STRAND 227 427 232 COLOUR_TEXT_REGION 227 427 232 427 51 HELIX 27 427 35 COLOUR_TEXT_REGION 27 427 35 427 50 HELIX 63 427 69 COLOUR_TEXT_REGION 63 427 69 427 50 HELIX 75 427 84 COLOUR_TEXT_REGION 75 427 84 427 50 HELIX 92 427 114 COLOUR_TEXT_REGION 92 427 114 427 50 HELIX 125 427 134 COLOUR_TEXT_REGION 125 427 134 427 50 HELIX 145 427 159 COLOUR_TEXT_REGION 145 427 159 427 50 HELIX 178 427 187 COLOUR_TEXT_REGION 178 427 187 427 50 HELIX 213 427 223 COLOUR_TEXT_REGION 213 427 223 427 50