SILENT_MODE BLOCK_FILE jp_tOqqT3p.concise.blc MAX_NSEQ 832 MAX_INPUT_LEN 834 OUTPUT_FILE jp_tOqqT3p.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 309 821 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 822 309 831 H SPACE SUB_CHARS 1 822 309 831 E SPACE SUB_CHARS 1 822 309 831 - SPACE STRAND 3 825 8 COLOUR_TEXT_REGION 3 825 8 825 51 STRAND 43 825 48 COLOUR_TEXT_REGION 43 825 48 825 51 STRAND 106 825 109 COLOUR_TEXT_REGION 106 825 109 825 51 STRAND 115 825 116 COLOUR_TEXT_REGION 115 825 116 825 51 STRAND 147 825 151 COLOUR_TEXT_REGION 147 825 151 825 51 STRAND 156 825 160 COLOUR_TEXT_REGION 156 825 160 825 51 STRAND 166 825 167 COLOUR_TEXT_REGION 166 825 167 825 51 STRAND 183 825 186 COLOUR_TEXT_REGION 183 825 186 825 51 STRAND 192 825 197 COLOUR_TEXT_REGION 192 825 197 825 51 STRAND 202 825 205 COLOUR_TEXT_REGION 202 825 205 825 51 STRAND 223 825 228 COLOUR_TEXT_REGION 223 825 228 825 51 STRAND 233 825 234 COLOUR_TEXT_REGION 233 825 234 825 51 STRAND 284 825 288 COLOUR_TEXT_REGION 284 825 288 825 51 STRAND 304 825 308 COLOUR_TEXT_REGION 304 825 308 825 51 HELIX 20 825 39 COLOUR_TEXT_REGION 20 825 39 825 50 HELIX 51 825 62 COLOUR_TEXT_REGION 51 825 62 825 50 HELIX 76 825 100 COLOUR_TEXT_REGION 76 825 100 825 50 HELIX 110 825 111 COLOUR_TEXT_REGION 110 825 111 825 50 HELIX 135 825 143 COLOUR_TEXT_REGION 135 825 143 825 50 HELIX 168 825 169 COLOUR_TEXT_REGION 168 825 169 825 50 HELIX 171 825 177 COLOUR_TEXT_REGION 171 825 177 825 50 HELIX 209 825 219 COLOUR_TEXT_REGION 209 825 219 825 50 HELIX 250 825 258 COLOUR_TEXT_REGION 250 825 258 825 50 HELIX 267 825 279 COLOUR_TEXT_REGION 267 825 279 825 50 HELIX 291 825 299 COLOUR_TEXT_REGION 291 825 299 825 50 STRAND 3 830 8 COLOUR_TEXT_REGION 3 830 8 830 51 STRAND 43 830 48 COLOUR_TEXT_REGION 43 830 48 830 51 STRAND 106 830 110 COLOUR_TEXT_REGION 106 830 110 830 51 STRAND 115 830 116 COLOUR_TEXT_REGION 115 830 116 830 51 STRAND 147 830 151 COLOUR_TEXT_REGION 147 830 151 830 51 STRAND 155 830 160 COLOUR_TEXT_REGION 155 830 160 830 51 STRAND 183 830 186 COLOUR_TEXT_REGION 183 830 186 830 51 STRAND 192 830 196 COLOUR_TEXT_REGION 192 830 196 830 51 STRAND 202 830 205 COLOUR_TEXT_REGION 202 830 205 830 51 STRAND 223 830 228 COLOUR_TEXT_REGION 223 830 228 830 51 STRAND 233 830 234 COLOUR_TEXT_REGION 233 830 234 830 51 STRAND 284 830 288 COLOUR_TEXT_REGION 284 830 288 830 51 STRAND 304 830 307 COLOUR_TEXT_REGION 304 830 307 830 51 HELIX 20 830 39 COLOUR_TEXT_REGION 20 830 39 830 50 HELIX 51 830 61 COLOUR_TEXT_REGION 51 830 61 830 50 HELIX 76 830 99 COLOUR_TEXT_REGION 76 830 99 830 50 HELIX 135 830 142 COLOUR_TEXT_REGION 135 830 142 830 50 HELIX 166 830 179 COLOUR_TEXT_REGION 166 830 179 830 50 HELIX 208 830 219 COLOUR_TEXT_REGION 208 830 219 830 50 HELIX 250 830 258 COLOUR_TEXT_REGION 250 830 258 830 50 HELIX 267 830 279 COLOUR_TEXT_REGION 267 830 279 830 50 HELIX 291 830 299 COLOUR_TEXT_REGION 291 830 299 830 50 STRAND 3 831 8 COLOUR_TEXT_REGION 3 831 8 831 51 STRAND 43 831 47 COLOUR_TEXT_REGION 43 831 47 831 51 STRAND 148 831 151 COLOUR_TEXT_REGION 148 831 151 831 51 STRAND 157 831 161 COLOUR_TEXT_REGION 157 831 161 831 51 STRAND 165 831 169 COLOUR_TEXT_REGION 165 831 169 831 51 STRAND 183 831 186 COLOUR_TEXT_REGION 183 831 186 831 51 STRAND 193 831 197 COLOUR_TEXT_REGION 193 831 197 831 51 STRAND 202 831 205 COLOUR_TEXT_REGION 202 831 205 831 51 STRAND 233 831 234 COLOUR_TEXT_REGION 233 831 234 831 51 STRAND 284 831 288 COLOUR_TEXT_REGION 284 831 288 831 51 STRAND 304 831 308 COLOUR_TEXT_REGION 304 831 308 831 51 HELIX 21 831 39 COLOUR_TEXT_REGION 21 831 39 831 50 HELIX 51 831 62 COLOUR_TEXT_REGION 51 831 62 831 50 HELIX 76 831 100 COLOUR_TEXT_REGION 76 831 100 831 50 HELIX 106 831 116 COLOUR_TEXT_REGION 106 831 116 831 50 HELIX 135 831 143 COLOUR_TEXT_REGION 135 831 143 831 50 HELIX 209 831 219 COLOUR_TEXT_REGION 209 831 219 831 50 HELIX 221 831 227 COLOUR_TEXT_REGION 221 831 227 831 50 HELIX 250 831 257 COLOUR_TEXT_REGION 250 831 257 831 50 HELIX 268 831 280 COLOUR_TEXT_REGION 268 831 280 831 50 HELIX 291 831 299 COLOUR_TEXT_REGION 291 831 299 831 50