SILENT_MODE BLOCK_FILE jp_P0zH2GT.concise.blc MAX_NSEQ 677 MAX_INPUT_LEN 679 OUTPUT_FILE jp_P0zH2GT.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 217 666 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 667 217 676 H SPACE SUB_CHARS 1 667 217 676 E SPACE SUB_CHARS 1 667 217 676 - SPACE STRAND 21 670 27 COLOUR_TEXT_REGION 21 670 27 670 51 STRAND 32 670 39 COLOUR_TEXT_REGION 32 670 39 670 51 STRAND 46 670 51 COLOUR_TEXT_REGION 46 670 51 670 51 STRAND 94 670 100 COLOUR_TEXT_REGION 94 670 100 670 51 STRAND 106 670 111 COLOUR_TEXT_REGION 106 670 111 670 51 STRAND 114 670 116 COLOUR_TEXT_REGION 114 670 116 670 51 STRAND 124 670 127 COLOUR_TEXT_REGION 124 670 127 670 51 STRAND 148 670 150 COLOUR_TEXT_REGION 148 670 150 670 51 STRAND 194 670 198 COLOUR_TEXT_REGION 194 670 198 670 51 STRAND 207 670 214 COLOUR_TEXT_REGION 207 670 214 670 51 HELIX 9 670 14 COLOUR_TEXT_REGION 9 670 14 670 50 HELIX 63 670 67 COLOUR_TEXT_REGION 63 670 67 670 50 HELIX 81 670 87 COLOUR_TEXT_REGION 81 670 87 670 50 STRAND 22 675 26 COLOUR_TEXT_REGION 22 675 26 675 51 STRAND 32 675 39 COLOUR_TEXT_REGION 32 675 39 675 51 STRAND 46 675 52 COLOUR_TEXT_REGION 46 675 52 675 51 STRAND 77 675 78 COLOUR_TEXT_REGION 77 675 78 675 51 STRAND 94 675 101 COLOUR_TEXT_REGION 94 675 101 675 51 STRAND 106 675 116 COLOUR_TEXT_REGION 106 675 116 675 51 STRAND 123 675 128 COLOUR_TEXT_REGION 123 675 128 675 51 STRAND 148 675 151 COLOUR_TEXT_REGION 148 675 151 675 51 STRAND 195 675 197 COLOUR_TEXT_REGION 195 675 197 675 51 STRAND 208 675 214 COLOUR_TEXT_REGION 208 675 214 675 51 HELIX 9 675 14 COLOUR_TEXT_REGION 9 675 14 675 50 HELIX 63 675 68 COLOUR_TEXT_REGION 63 675 68 675 50 HELIX 79 675 79 COLOUR_TEXT_REGION 79 675 79 675 50 HELIX 81 675 88 COLOUR_TEXT_REGION 81 675 88 675 50 STRAND 21 676 27 COLOUR_TEXT_REGION 21 676 27 676 51 STRAND 32 676 38 COLOUR_TEXT_REGION 32 676 38 676 51 STRAND 46 676 50 COLOUR_TEXT_REGION 46 676 50 676 51 STRAND 56 676 57 COLOUR_TEXT_REGION 56 676 57 676 51 STRAND 94 676 97 COLOUR_TEXT_REGION 94 676 97 676 51 STRAND 115 676 116 COLOUR_TEXT_REGION 115 676 116 676 51 STRAND 169 676 172 COLOUR_TEXT_REGION 169 676 172 676 51 STRAND 194 676 199 COLOUR_TEXT_REGION 194 676 199 676 51 STRAND 205 676 214 COLOUR_TEXT_REGION 205 676 214 676 51 HELIX 9 676 14 COLOUR_TEXT_REGION 9 676 14 676 50 HELIX 58 676 58 COLOUR_TEXT_REGION 58 676 58 676 50 HELIX 60 676 66 COLOUR_TEXT_REGION 60 676 66 676 50 HELIX 103 676 110 COLOUR_TEXT_REGION 103 676 110 676 50