SILENT_MODE BLOCK_FILE jp_C7r7nOw.concise.blc MAX_NSEQ 610 MAX_INPUT_LEN 612 OUTPUT_FILE jp_C7r7nOw.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 131 599 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 600 131 609 H SPACE SUB_CHARS 1 600 131 609 E SPACE SUB_CHARS 1 600 131 609 - SPACE STRAND 4 603 10 COLOUR_TEXT_REGION 4 603 10 603 51 STRAND 17 603 26 COLOUR_TEXT_REGION 17 603 26 603 51 STRAND 37 603 42 COLOUR_TEXT_REGION 37 603 42 603 51 STRAND 46 603 53 COLOUR_TEXT_REGION 46 603 53 603 51 STRAND 59 603 65 COLOUR_TEXT_REGION 59 603 65 603 51 STRAND 71 603 77 COLOUR_TEXT_REGION 71 603 77 603 51 STRAND 90 603 96 COLOUR_TEXT_REGION 90 603 96 603 51 STRAND 101 603 107 COLOUR_TEXT_REGION 101 603 107 603 51 STRAND 112 603 114 COLOUR_TEXT_REGION 112 603 114 603 51 STRAND 121 603 128 COLOUR_TEXT_REGION 121 603 128 603 51 STRAND 4 608 10 COLOUR_TEXT_REGION 4 608 10 608 51 STRAND 17 608 27 COLOUR_TEXT_REGION 17 608 27 608 51 STRAND 37 608 42 COLOUR_TEXT_REGION 37 608 42 608 51 STRAND 45 608 54 COLOUR_TEXT_REGION 45 608 54 608 51 STRAND 60 608 66 COLOUR_TEXT_REGION 60 608 66 608 51 STRAND 71 608 77 COLOUR_TEXT_REGION 71 608 77 608 51 STRAND 89 608 97 COLOUR_TEXT_REGION 89 608 97 608 51 STRAND 101 608 107 COLOUR_TEXT_REGION 101 608 107 608 51 STRAND 112 608 114 COLOUR_TEXT_REGION 112 608 114 608 51 STRAND 121 608 127 COLOUR_TEXT_REGION 121 608 127 608 51 STRAND 5 609 10 COLOUR_TEXT_REGION 5 609 10 609 51 STRAND 17 609 25 COLOUR_TEXT_REGION 17 609 25 609 51 STRAND 37 609 42 COLOUR_TEXT_REGION 37 609 42 609 51 STRAND 46 609 52 COLOUR_TEXT_REGION 46 609 52 609 51 STRAND 58 609 64 COLOUR_TEXT_REGION 58 609 64 609 51 STRAND 71 609 77 COLOUR_TEXT_REGION 71 609 77 609 51 STRAND 91 609 96 COLOUR_TEXT_REGION 91 609 96 609 51 STRAND 101 609 106 COLOUR_TEXT_REGION 101 609 106 609 51 STRAND 112 609 114 COLOUR_TEXT_REGION 112 609 114 609 51 STRAND 121 609 128 COLOUR_TEXT_REGION 121 609 128 609 51