SILENT_MODE
BLOCK_FILE jp_SflCI7j.concise.blc
MAX_NSEQ 118
MAX_INPUT_LEN 120
OUTPUT_FILE jp_SflCI7j.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 226 107   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 108 226 117 H SPACE
SUB_CHARS 1 108 226 117 E SPACE
SUB_CHARS 1 108 226 117 - SPACE
STRAND 11 111 20
COLOUR_TEXT_REGION 11 111 20 111 51
STRAND 24 111 33
COLOUR_TEXT_REGION 24 111 33 111 51
STRAND 38 111 47
COLOUR_TEXT_REGION 38 111 47 111 51
STRAND 88 111 95
COLOUR_TEXT_REGION 88 111 95 111 51
STRAND 99 111 109
COLOUR_TEXT_REGION 99 111 109 111 51
STRAND 113 111 123
COLOUR_TEXT_REGION 113 111 123 111 51
STRAND 143 111 147
COLOUR_TEXT_REGION 143 111 147 111 51
STRAND 156 111 164
COLOUR_TEXT_REGION 156 111 164 111 51
STRAND 171 111 179
COLOUR_TEXT_REGION 171 111 179 111 51
STRAND 195 111 204
COLOUR_TEXT_REGION 195 111 204 111 51
STRAND 212 111 222
COLOUR_TEXT_REGION 212 111 222 111 51
HELIX 56 111 63
COLOUR_TEXT_REGION 56 111 63 111 50
HELIX 78 111 81
COLOUR_TEXT_REGION 78 111 81 111 50
STRAND 12 116 20
COLOUR_TEXT_REGION 12 116 20 116 51
STRAND 23 116 33
COLOUR_TEXT_REGION 23 116 33 116 51
STRAND 38 116 47
COLOUR_TEXT_REGION 38 116 47 116 51
STRAND 88 116 95
COLOUR_TEXT_REGION 88 116 95 116 51
STRAND 99 116 110
COLOUR_TEXT_REGION 99 116 110 116 51
STRAND 113 116 123
COLOUR_TEXT_REGION 113 116 123 116 51
STRAND 143 116 147
COLOUR_TEXT_REGION 143 116 147 116 51
STRAND 156 116 164
COLOUR_TEXT_REGION 156 116 164 116 51
STRAND 171 116 178
COLOUR_TEXT_REGION 171 116 178 116 51
STRAND 195 116 204
COLOUR_TEXT_REGION 195 116 204 116 51
STRAND 212 116 223
COLOUR_TEXT_REGION 212 116 223 116 51
HELIX 56 116 62
COLOUR_TEXT_REGION 56 116 62 116 50
HELIX 78 116 81
COLOUR_TEXT_REGION 78 116 81 116 50
STRAND 11 117 20
COLOUR_TEXT_REGION 11 117 20 117 51
STRAND 24 117 31
COLOUR_TEXT_REGION 24 117 31 117 51
STRAND 39 117 47
COLOUR_TEXT_REGION 39 117 47 117 51
STRAND 63 117 68
COLOUR_TEXT_REGION 63 117 68 117 51
STRAND 88 117 95
COLOUR_TEXT_REGION 88 117 95 117 51
STRAND 99 117 109
COLOUR_TEXT_REGION 99 117 109 117 51
STRAND 113 117 123
COLOUR_TEXT_REGION 113 117 123 117 51
STRAND 136 117 137
COLOUR_TEXT_REGION 136 117 137 117 51
STRAND 143 117 147
COLOUR_TEXT_REGION 143 117 147 117 51
STRAND 171 117 175
COLOUR_TEXT_REGION 171 117 175 117 51
STRAND 179 117 179
COLOUR_TEXT_REGION 179 117 179 117 51
STRAND 194 117 204
COLOUR_TEXT_REGION 194 117 204 117 51
STRAND 212 117 222
COLOUR_TEXT_REGION 212 117 222 117 51
HELIX 56 117 62
COLOUR_TEXT_REGION 56 117 62 117 50
HELIX 78 117 82
COLOUR_TEXT_REGION 78 117 82 117 50
HELIX 157 117 164
COLOUR_TEXT_REGION 157 117 164 117 50