SILENT_MODE BLOCK_FILE jp_fCRg4VA.concise.blc MAX_NSEQ 1059 MAX_INPUT_LEN 1061 OUTPUT_FILE jp_fCRg4VA.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 122 1048 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1049 122 1058 H SPACE SUB_CHARS 1 1049 122 1058 E SPACE SUB_CHARS 1 1049 122 1058 - SPACE STRAND 4 1052 6 COLOUR_TEXT_REGION 4 1052 6 1052 51 STRAND 9 1052 13 COLOUR_TEXT_REGION 9 1052 13 1052 51 STRAND 17 1052 26 COLOUR_TEXT_REGION 17 1052 26 1052 51 STRAND 33 1052 41 COLOUR_TEXT_REGION 33 1052 41 1052 51 STRAND 53 1052 53 COLOUR_TEXT_REGION 53 1052 53 1052 51 STRAND 68 1052 76 COLOUR_TEXT_REGION 68 1052 76 1052 51 STRAND 80 1052 83 COLOUR_TEXT_REGION 80 1052 83 1052 51 STRAND 88 1052 90 COLOUR_TEXT_REGION 88 1052 90 1052 51 STRAND 94 1052 99 COLOUR_TEXT_REGION 94 1052 99 1052 51 STRAND 106 1052 114 COLOUR_TEXT_REGION 106 1052 114 1052 51 STRAND 118 1052 120 COLOUR_TEXT_REGION 118 1052 120 1052 51 HELIX 51 1052 52 COLOUR_TEXT_REGION 51 1052 52 1052 50 HELIX 54 1052 55 COLOUR_TEXT_REGION 54 1052 55 1052 50 HELIX 59 1052 59 COLOUR_TEXT_REGION 59 1052 59 1052 50 STRAND 4 1057 6 COLOUR_TEXT_REGION 4 1057 6 1057 51 STRAND 9 1057 13 COLOUR_TEXT_REGION 9 1057 13 1057 51 STRAND 17 1057 26 COLOUR_TEXT_REGION 17 1057 26 1057 51 STRAND 34 1057 40 COLOUR_TEXT_REGION 34 1057 40 1057 51 STRAND 52 1057 54 COLOUR_TEXT_REGION 52 1057 54 1057 51 STRAND 68 1057 75 COLOUR_TEXT_REGION 68 1057 75 1057 51 STRAND 79 1057 83 COLOUR_TEXT_REGION 79 1057 83 1057 51 STRAND 88 1057 90 COLOUR_TEXT_REGION 88 1057 90 1057 51 STRAND 94 1057 99 COLOUR_TEXT_REGION 94 1057 99 1057 51 STRAND 107 1057 114 COLOUR_TEXT_REGION 107 1057 114 1057 51 STRAND 118 1057 120 COLOUR_TEXT_REGION 118 1057 120 1057 51 STRAND 4 1058 6 COLOUR_TEXT_REGION 4 1058 6 1058 51 STRAND 9 1058 13 COLOUR_TEXT_REGION 9 1058 13 1058 51 STRAND 17 1058 26 COLOUR_TEXT_REGION 17 1058 26 1058 51 STRAND 32 1058 41 COLOUR_TEXT_REGION 32 1058 41 1058 51 STRAND 68 1058 76 COLOUR_TEXT_REGION 68 1058 76 1058 51 STRAND 81 1058 83 COLOUR_TEXT_REGION 81 1058 83 1058 51 STRAND 88 1058 91 COLOUR_TEXT_REGION 88 1058 91 1058 51 STRAND 95 1058 99 COLOUR_TEXT_REGION 95 1058 99 1058 51 STRAND 106 1058 114 COLOUR_TEXT_REGION 106 1058 114 1058 51 STRAND 118 1058 120 COLOUR_TEXT_REGION 118 1058 120 1058 51 HELIX 51 1058 61 COLOUR_TEXT_REGION 51 1058 61 1058 50