SILENT_MODE BLOCK_FILE jp_jeuy1Ol.concise.blc MAX_NSEQ 959 MAX_INPUT_LEN 961 OUTPUT_FILE jp_jeuy1Ol.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 93 948 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 949 93 958 H SPACE SUB_CHARS 1 949 93 958 E SPACE SUB_CHARS 1 949 93 958 - SPACE STRAND 7 952 13 COLOUR_TEXT_REGION 7 952 13 952 51 STRAND 31 952 34 COLOUR_TEXT_REGION 31 952 34 952 51 STRAND 52 952 54 COLOUR_TEXT_REGION 52 952 54 952 51 STRAND 66 952 71 COLOUR_TEXT_REGION 66 952 71 952 51 HELIX 14 952 26 COLOUR_TEXT_REGION 14 952 26 952 50 HELIX 40 952 47 COLOUR_TEXT_REGION 40 952 47 952 50 HELIX 78 952 86 COLOUR_TEXT_REGION 78 952 86 952 50 STRAND 7 957 12 COLOUR_TEXT_REGION 7 957 12 957 51 STRAND 30 957 35 COLOUR_TEXT_REGION 30 957 35 957 51 STRAND 52 957 54 COLOUR_TEXT_REGION 52 957 54 957 51 STRAND 67 957 71 COLOUR_TEXT_REGION 67 957 71 957 51 HELIX 13 957 26 COLOUR_TEXT_REGION 13 957 26 957 50 HELIX 40 957 47 COLOUR_TEXT_REGION 40 957 47 957 50 HELIX 79 957 86 COLOUR_TEXT_REGION 79 957 86 957 50 STRAND 7 958 13 COLOUR_TEXT_REGION 7 958 13 958 51 STRAND 31 958 33 COLOUR_TEXT_REGION 31 958 33 958 51 STRAND 51 958 54 COLOUR_TEXT_REGION 51 958 54 958 51 STRAND 66 958 70 COLOUR_TEXT_REGION 66 958 70 958 51 HELIX 16 958 26 COLOUR_TEXT_REGION 16 958 26 958 50 HELIX 40 958 47 COLOUR_TEXT_REGION 40 958 47 958 50 HELIX 78 958 86 COLOUR_TEXT_REGION 78 958 86 958 50