SILENT_MODE BLOCK_FILE jp_T6G4pK9.concise.blc MAX_NSEQ 1003 MAX_INPUT_LEN 1005 OUTPUT_FILE jp_T6G4pK9.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 142 992 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 993 142 1002 H SPACE SUB_CHARS 1 993 142 1002 E SPACE SUB_CHARS 1 993 142 1002 - SPACE STRAND 6 996 10 COLOUR_TEXT_REGION 6 996 10 996 51 STRAND 15 996 19 COLOUR_TEXT_REGION 15 996 19 996 51 STRAND 42 996 47 COLOUR_TEXT_REGION 42 996 47 996 51 STRAND 66 996 71 COLOUR_TEXT_REGION 66 996 71 996 51 STRAND 88 996 89 COLOUR_TEXT_REGION 88 996 89 996 51 STRAND 109 996 112 COLOUR_TEXT_REGION 109 996 112 996 51 HELIX 26 996 35 COLOUR_TEXT_REGION 26 996 35 996 50 HELIX 55 996 63 COLOUR_TEXT_REGION 55 996 63 996 50 HELIX 76 996 83 COLOUR_TEXT_REGION 76 996 83 996 50 HELIX 93 996 104 COLOUR_TEXT_REGION 93 996 104 996 50 HELIX 125 996 139 COLOUR_TEXT_REGION 125 996 139 996 50 STRAND 7 1001 11 COLOUR_TEXT_REGION 7 1001 11 1001 51 STRAND 15 1001 19 COLOUR_TEXT_REGION 15 1001 19 1001 51 STRAND 42 1001 47 COLOUR_TEXT_REGION 42 1001 47 1001 51 STRAND 66 1001 72 COLOUR_TEXT_REGION 66 1001 72 1001 51 STRAND 88 1001 89 COLOUR_TEXT_REGION 88 1001 89 1001 51 STRAND 109 1001 112 COLOUR_TEXT_REGION 109 1001 112 1001 51 HELIX 26 1001 34 COLOUR_TEXT_REGION 26 1001 34 1001 50 HELIX 55 1001 63 COLOUR_TEXT_REGION 55 1001 63 1001 50 HELIX 76 1001 83 COLOUR_TEXT_REGION 76 1001 83 1001 50 HELIX 93 1001 104 COLOUR_TEXT_REGION 93 1001 104 1001 50 HELIX 125 1001 140 COLOUR_TEXT_REGION 125 1001 140 1001 50 STRAND 5 1002 10 COLOUR_TEXT_REGION 5 1002 10 1002 51 STRAND 15 1002 19 COLOUR_TEXT_REGION 15 1002 19 1002 51 STRAND 42 1002 47 COLOUR_TEXT_REGION 42 1002 47 1002 51 STRAND 66 1002 71 COLOUR_TEXT_REGION 66 1002 71 1002 51 STRAND 88 1002 89 COLOUR_TEXT_REGION 88 1002 89 1002 51 STRAND 109 1002 113 COLOUR_TEXT_REGION 109 1002 113 1002 51 HELIX 26 1002 36 COLOUR_TEXT_REGION 26 1002 36 1002 50 HELIX 58 1002 63 COLOUR_TEXT_REGION 58 1002 63 1002 50 HELIX 76 1002 82 COLOUR_TEXT_REGION 76 1002 82 1002 50 HELIX 93 1002 104 COLOUR_TEXT_REGION 93 1002 104 1002 50 HELIX 125 1002 139 COLOUR_TEXT_REGION 125 1002 139 1002 50