SILENT_MODE BLOCK_FILE jp_o05UCFh.concise.blc MAX_NSEQ 730 MAX_INPUT_LEN 732 OUTPUT_FILE jp_o05UCFh.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 126 719 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 720 126 729 H SPACE SUB_CHARS 1 720 126 729 E SPACE SUB_CHARS 1 720 126 729 - SPACE STRAND 35 723 40 COLOUR_TEXT_REGION 35 723 40 723 51 STRAND 45 723 50 COLOUR_TEXT_REGION 45 723 50 723 51 STRAND 53 723 59 COLOUR_TEXT_REGION 53 723 59 723 51 STRAND 63 723 69 COLOUR_TEXT_REGION 63 723 69 723 51 HELIX 82 723 91 COLOUR_TEXT_REGION 82 723 91 723 50 HELIX 97 723 104 COLOUR_TEXT_REGION 97 723 104 723 50 HELIX 109 723 117 COLOUR_TEXT_REGION 109 723 117 723 50 STRAND 35 728 40 COLOUR_TEXT_REGION 35 728 40 728 51 STRAND 45 728 50 COLOUR_TEXT_REGION 45 728 50 728 51 STRAND 53 728 59 COLOUR_TEXT_REGION 53 728 59 728 51 STRAND 63 728 69 COLOUR_TEXT_REGION 63 728 69 728 51 HELIX 26 728 29 COLOUR_TEXT_REGION 26 728 29 728 50 HELIX 82 728 90 COLOUR_TEXT_REGION 82 728 90 728 50 HELIX 97 728 104 COLOUR_TEXT_REGION 97 728 104 728 50 HELIX 109 728 116 COLOUR_TEXT_REGION 109 728 116 728 50 STRAND 15 729 16 COLOUR_TEXT_REGION 15 729 16 729 51 STRAND 35 729 40 COLOUR_TEXT_REGION 35 729 40 729 51 STRAND 45 729 50 COLOUR_TEXT_REGION 45 729 50 729 51 STRAND 54 729 59 COLOUR_TEXT_REGION 54 729 59 729 51 STRAND 64 729 69 COLOUR_TEXT_REGION 64 729 69 729 51 HELIX 83 729 92 COLOUR_TEXT_REGION 83 729 92 729 50 HELIX 97 729 105 COLOUR_TEXT_REGION 97 729 105 729 50 HELIX 109 729 117 COLOUR_TEXT_REGION 109 729 117 729 50