SILENT_MODE BLOCK_FILE jp_hbC0OEI.concise.blc MAX_NSEQ 598 MAX_INPUT_LEN 600 OUTPUT_FILE jp_hbC0OEI.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 181 587 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 588 181 597 H SPACE SUB_CHARS 1 588 181 597 E SPACE SUB_CHARS 1 588 181 597 - SPACE STRAND 46 591 46 COLOUR_TEXT_REGION 46 591 46 591 51 HELIX 5 591 22 COLOUR_TEXT_REGION 5 591 22 591 50 HELIX 26 591 33 COLOUR_TEXT_REGION 26 591 33 591 50 HELIX 47 591 55 COLOUR_TEXT_REGION 47 591 55 591 50 HELIX 58 591 79 COLOUR_TEXT_REGION 58 591 79 591 50 HELIX 82 591 102 COLOUR_TEXT_REGION 82 591 102 591 50 HELIX 108 591 128 COLOUR_TEXT_REGION 108 591 128 591 50 HELIX 136 591 152 COLOUR_TEXT_REGION 136 591 152 591 50 HELIX 160 591 178 COLOUR_TEXT_REGION 160 591 178 591 50 STRAND 46 596 48 COLOUR_TEXT_REGION 46 596 48 596 51 HELIX 5 596 22 COLOUR_TEXT_REGION 5 596 22 596 50 HELIX 26 596 33 COLOUR_TEXT_REGION 26 596 33 596 50 HELIX 49 596 55 COLOUR_TEXT_REGION 49 596 55 596 50 HELIX 58 596 79 COLOUR_TEXT_REGION 58 596 79 596 50 HELIX 81 596 102 COLOUR_TEXT_REGION 81 596 102 596 50 HELIX 107 596 127 COLOUR_TEXT_REGION 107 596 127 596 50 HELIX 136 596 151 COLOUR_TEXT_REGION 136 596 151 596 50 HELIX 160 596 179 COLOUR_TEXT_REGION 160 596 179 596 50 STRAND 45 597 45 COLOUR_TEXT_REGION 45 597 45 597 51 HELIX 5 597 22 COLOUR_TEXT_REGION 5 597 22 597 50 HELIX 27 597 33 COLOUR_TEXT_REGION 27 597 33 597 50 HELIX 46 597 56 COLOUR_TEXT_REGION 46 597 56 597 50 HELIX 58 597 78 COLOUR_TEXT_REGION 58 597 78 597 50 HELIX 83 597 102 COLOUR_TEXT_REGION 83 597 102 597 50 HELIX 108 597 129 COLOUR_TEXT_REGION 108 597 129 597 50 HELIX 133 597 153 COLOUR_TEXT_REGION 133 597 153 597 50 HELIX 159 597 178 COLOUR_TEXT_REGION 159 597 178 597 50