SILENT_MODE BLOCK_FILE jp_q6WTvo3.concise.blc MAX_NSEQ 835 MAX_INPUT_LEN 837 OUTPUT_FILE jp_q6WTvo3.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 355 824 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 825 355 834 H SPACE SUB_CHARS 1 825 355 834 E SPACE SUB_CHARS 1 825 355 834 - SPACE STRAND 8 828 12 COLOUR_TEXT_REGION 8 828 12 828 51 STRAND 32 828 35 COLOUR_TEXT_REGION 32 828 35 828 51 STRAND 75 828 77 COLOUR_TEXT_REGION 75 828 77 828 51 STRAND 102 828 107 COLOUR_TEXT_REGION 102 828 107 828 51 STRAND 178 828 181 COLOUR_TEXT_REGION 178 828 181 828 51 STRAND 229 828 232 COLOUR_TEXT_REGION 229 828 232 828 51 STRAND 293 828 293 COLOUR_TEXT_REGION 293 828 293 828 51 STRAND 314 828 316 COLOUR_TEXT_REGION 314 828 316 828 51 STRAND 321 828 328 COLOUR_TEXT_REGION 321 828 328 828 51 HELIX 17 828 27 COLOUR_TEXT_REGION 17 828 27 828 50 HELIX 51 828 54 COLOUR_TEXT_REGION 51 828 54 828 50 HELIX 59 828 70 COLOUR_TEXT_REGION 59 828 70 828 50 HELIX 83 828 87 COLOUR_TEXT_REGION 83 828 87 828 50 HELIX 91 828 97 COLOUR_TEXT_REGION 91 828 97 828 50 HELIX 121 828 132 COLOUR_TEXT_REGION 121 828 132 828 50 HELIX 151 828 172 COLOUR_TEXT_REGION 151 828 172 828 50 HELIX 183 828 199 COLOUR_TEXT_REGION 183 828 199 828 50 HELIX 237 828 245 COLOUR_TEXT_REGION 237 828 245 828 50 HELIX 263 828 274 COLOUR_TEXT_REGION 263 828 274 828 50 HELIX 279 828 288 COLOUR_TEXT_REGION 279 828 288 828 50 HELIX 299 828 302 COLOUR_TEXT_REGION 299 828 302 828 50 HELIX 306 828 310 COLOUR_TEXT_REGION 306 828 310 828 50 HELIX 346 828 353 COLOUR_TEXT_REGION 346 828 353 828 50 STRAND 8 833 12 COLOUR_TEXT_REGION 8 833 12 833 51 STRAND 32 833 35 COLOUR_TEXT_REGION 32 833 35 833 51 STRAND 53 833 54 COLOUR_TEXT_REGION 53 833 54 833 51 STRAND 74 833 77 COLOUR_TEXT_REGION 74 833 77 833 51 STRAND 102 833 107 COLOUR_TEXT_REGION 102 833 107 833 51 STRAND 177 833 181 COLOUR_TEXT_REGION 177 833 181 833 51 STRAND 228 833 233 COLOUR_TEXT_REGION 228 833 233 833 51 STRAND 293 833 294 COLOUR_TEXT_REGION 293 833 294 833 51 STRAND 313 833 316 COLOUR_TEXT_REGION 313 833 316 833 51 STRAND 322 833 328 COLOUR_TEXT_REGION 322 833 328 833 51 HELIX 17 833 27 COLOUR_TEXT_REGION 17 833 27 833 50 HELIX 59 833 70 COLOUR_TEXT_REGION 59 833 70 833 50 HELIX 83 833 86 COLOUR_TEXT_REGION 83 833 86 833 50 HELIX 91 833 97 COLOUR_TEXT_REGION 91 833 97 833 50 HELIX 121 833 134 COLOUR_TEXT_REGION 121 833 134 833 50 HELIX 151 833 172 COLOUR_TEXT_REGION 151 833 172 833 50 HELIX 182 833 199 COLOUR_TEXT_REGION 182 833 199 833 50 HELIX 237 833 246 COLOUR_TEXT_REGION 237 833 246 833 50 HELIX 261 833 275 COLOUR_TEXT_REGION 261 833 275 833 50 HELIX 279 833 288 COLOUR_TEXT_REGION 279 833 288 833 50 HELIX 299 833 303 COLOUR_TEXT_REGION 299 833 303 833 50 HELIX 306 833 310 COLOUR_TEXT_REGION 306 833 310 833 50 HELIX 346 833 353 COLOUR_TEXT_REGION 346 833 353 833 50 STRAND 8 834 12 COLOUR_TEXT_REGION 8 834 12 834 51 STRAND 32 834 35 COLOUR_TEXT_REGION 32 834 35 834 51 STRAND 76 834 76 COLOUR_TEXT_REGION 76 834 76 834 51 STRAND 103 834 106 COLOUR_TEXT_REGION 103 834 106 834 51 STRAND 178 834 180 COLOUR_TEXT_REGION 178 834 180 834 51 STRAND 229 834 232 COLOUR_TEXT_REGION 229 834 232 834 51 STRAND 292 834 293 COLOUR_TEXT_REGION 292 834 293 834 51 STRAND 314 834 316 COLOUR_TEXT_REGION 314 834 316 834 51 STRAND 321 834 325 COLOUR_TEXT_REGION 321 834 325 834 51 STRAND 327 834 328 COLOUR_TEXT_REGION 327 834 328 834 51 HELIX 16 834 27 COLOUR_TEXT_REGION 16 834 27 834 50 HELIX 49 834 55 COLOUR_TEXT_REGION 49 834 55 834 50 HELIX 59 834 69 COLOUR_TEXT_REGION 59 834 69 834 50 HELIX 83 834 88 COLOUR_TEXT_REGION 83 834 88 834 50 HELIX 92 834 98 COLOUR_TEXT_REGION 92 834 98 834 50 HELIX 123 834 129 COLOUR_TEXT_REGION 123 834 129 834 50 HELIX 153 834 172 COLOUR_TEXT_REGION 153 834 172 834 50 HELIX 191 834 199 COLOUR_TEXT_REGION 191 834 199 834 50 HELIX 238 834 244 COLOUR_TEXT_REGION 238 834 244 834 50 HELIX 266 834 274 COLOUR_TEXT_REGION 266 834 274 834 50 HELIX 279 834 291 COLOUR_TEXT_REGION 279 834 291 834 50 HELIX 305 834 310 COLOUR_TEXT_REGION 305 834 310 834 50 HELIX 346 834 353 COLOUR_TEXT_REGION 346 834 353 834 50