SILENT_MODE
BLOCK_FILE jp_KbKxGwa.concise.blc
MAX_NSEQ 50
MAX_INPUT_LEN 50
OUTPUT_FILE jp_KbKxGwa.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 153 14   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 15 153 24 H SPACE
SUB_CHARS 1 15 153 24 E SPACE
SUB_CHARS 1 15 153 24 - SPACE
STRAND 67 18 69
COLOUR_TEXT_REGION 67 18 69 18 51
STRAND 102 18 103
COLOUR_TEXT_REGION 102 18 103 18 51
HELIX 5 18 18
COLOUR_TEXT_REGION 5 18 18 18 50
HELIX 25 18 35
COLOUR_TEXT_REGION 25 18 35 18 50
HELIX 42 18 51
COLOUR_TEXT_REGION 42 18 51 18 50
HELIX 57 18 66
COLOUR_TEXT_REGION 57 18 66 18 50
HELIX 76 18 81
COLOUR_TEXT_REGION 76 18 81 18 50
HELIX 88 18 99
COLOUR_TEXT_REGION 88 18 99 18 50
HELIX 108 18 111
COLOUR_TEXT_REGION 108 18 111 18 50
HELIX 117 18 127
COLOUR_TEXT_REGION 117 18 127 18 50
HELIX 134 18 150
COLOUR_TEXT_REGION 134 18 150 18 50
STRAND 5 23 6
COLOUR_TEXT_REGION 5 23 6 23 51
STRAND 66 23 70
COLOUR_TEXT_REGION 66 23 70 23 51
STRAND 101 23 104
COLOUR_TEXT_REGION 101 23 104 23 51
HELIX 7 23 7
COLOUR_TEXT_REGION 7 23 7 23 50
HELIX 9 23 18
COLOUR_TEXT_REGION 9 23 18 23 50
HELIX 25 23 35
COLOUR_TEXT_REGION 25 23 35 23 50
HELIX 42 23 51
COLOUR_TEXT_REGION 42 23 51 23 50
HELIX 57 23 65
COLOUR_TEXT_REGION 57 23 65 23 50
HELIX 76 23 81
COLOUR_TEXT_REGION 76 23 81 23 50
HELIX 88 23 99
COLOUR_TEXT_REGION 88 23 99 23 50
HELIX 108 23 111
COLOUR_TEXT_REGION 108 23 111 23 50
HELIX 116 23 127
COLOUR_TEXT_REGION 116 23 127 23 50
HELIX 134 23 150
COLOUR_TEXT_REGION 134 23 150 23 50
HELIX 5 24 17
COLOUR_TEXT_REGION 5 24 17 24 50
HELIX 25 24 35
COLOUR_TEXT_REGION 25 24 35 24 50
HELIX 42 24 51
COLOUR_TEXT_REGION 42 24 51 24 50
HELIX 57 24 69
COLOUR_TEXT_REGION 57 24 69 24 50
HELIX 75 24 80
COLOUR_TEXT_REGION 75 24 80 24 50
HELIX 88 24 99
COLOUR_TEXT_REGION 88 24 99 24 50
HELIX 107 24 111
COLOUR_TEXT_REGION 107 24 111 24 50
HELIX 120 24 127
COLOUR_TEXT_REGION 120 24 127 24 50
HELIX 133 24 150
COLOUR_TEXT_REGION 133 24 150 24 50